C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000154435 pds5b-001 ENSDARG00000061312 7955 + 15:32066768-32129977 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000154435
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000154435 17.023±8.45 5.529±2.17 5.511±3.75 0.359±0.00 2.757±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FL CIL_0006FL_0001 CGP 15:32055654-32129977

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016569 Pds5b-001 protein_coding Mus_musculus 0 2041
ENSMUST00000038900 Pds5b-201 protein_coding Mus_musculus 0 2041
ENSMUST00000110486 Pds5b-002 protein_coding Mus_musculus 0 983
ENST00000315596 PDS5B-006 protein_coding Homo_sapiens 0 1842
ENST00000450460 PDS5B-007 nonsense_mediated_decay Homo_sapiens 0 1842

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