C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerisation domain containing 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001125 Kctd10-002 ENSMUSG00000001098 10090 - 5:114365622-114380483 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VO CIL_0001VO_0002 CGP 5:114254164-114364576
CIL_0001GP CIL_0001GP_0003 CGP 5:114314941-114380515
CIL_0001GM CIL_0001GM_0003 CGP 5:114363567-114421168

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0036038 IDA TCTN-B9D complex
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228495 KCTD10-001 protein_coding Homo_sapiens 0 1269
ENST00000440541 KCTD10-002 nonsense_mediated_decay Homo_sapiens 0 686
ENST00000535546 KCTD10-012 protein_coding Homo_sapiens 0 612
ENST00000535747 KCTD10-010 retained_intron Homo_sapiens 0 580
ENST00000537165 KCTD10-003 nonsense_mediated_decay Homo_sapiens 0 1205
ENST00000538161 KCTD10-005 processed_transcript Homo_sapiens 0 889
ENST00000538377 KCTD10-009 retained_intron Homo_sapiens 0 363
ENST00000540089 KCTD10-007 protein_coding Homo_sapiens 0 688
ENST00000540355 KCTD10-013 protein_coding Homo_sapiens 0 555
ENST00000540402 KCTD10-014 retained_intron Homo_sapiens 0 503
ENST00000540411 KCTD10-004 protein_coding Homo_sapiens 0 652
ENST00000541077 KCTD10-008 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000542262 KCTD10-016 protein_coding Homo_sapiens 0 592
ENST00000542858 KCTD10-015 protein_coding Homo_sapiens 0 580
ENST00000542954 KCTD10-011 protein_coding Homo_sapiens 0 614
ENST00000545759 KCTD10-006 retained_intron Homo_sapiens 0 529

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