C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001X1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000037998-ENSDARG00000037997 CGP 7955 16:11904517-11944510
GeneTranscriptPositionBiotype
ENSDARG00000037997 (tubb5)
tubulin, beta 5
ENSDART00000055380 (tubb5-201) 11935861-11944510 protein_coding
ENSDARG00000037998 (flot1b)
flotillin 1b
ENSDART00000055381 (flot1b-201) 11904521-11933254 protein_coding
ENSDART00000104025 (flot1b-001) 11904517-11933288 protein_coding
CIL_0001X1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059714-ENSMUSG00000001525 CGP 10090 17:35823230-35838306
GeneTranscriptPositionBiotype
ENSMUSG00000001525 (Tubb5)
tubulin, beta 5 class I
ENSMUST00000001566 (Tubb5-001) 35833921-35838306 protein_coding
ENSMUST00000134978 (Tubb5-003) 35835901-35838208 protein_coding
ENSMUST00000156050 (Tubb5-002) 35836247-35838217 retained_intron
ENSMUST00000173253 (Tubb5-004) 35835605-35837060 retained_intron
ENSMUSG00000059714 (Flot1)
flotillin 1
ENSMUST00000001569 (Flot1-001) 35823230-35832791 protein_coding
ENSMUST00000172846 (Flot1-003) 35823593-35825744 protein_coding
ENSMUST00000173147 (Flot1-006) 35823549-35825757 protein_coding
ENSMUST00000173273 (Flot1-009) 35830499-35832640 retained_intron
ENSMUST00000173337 (Flot1-004) 35823996-35824928 retained_intron
ENSMUST00000173381 (Flot1-008) 35830086-35832626 retained_intron
ENSMUST00000173493 (Flot1-005) 35823526-35825745 protein_coding
ENSMUST00000173628 (Flot1-002) 35823382-35830024 nonsense_mediated_decay
ENSMUST00000174080 (Flot1-011) 35823347-35832610 protein_coding
ENSMUST00000174227 (Flot1-007) 35823426-35824398 retained_intron
ENSMUST00000174297 (Flot1-010) 35830638-35831470 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001X1_0001ENSDARG00000037997ENSDART00000055380ENSDARG00000037998ENSDART00000055381ENSDART00000104025CIL_0001X1_0002ENSMUSG00000001525ENSMUST00000001566ENSMUST00000134978ENSMUST00000156050ENSMUST00000173253ENSMUSG00000059714ENSMUST00000001569ENSMUST00000172846ENSMUST00000173147ENSMUST00000173273ENSMUST00000173337ENSMUST00000173381ENSMUST00000173493ENSMUST00000173628ENSMUST00000174080ENSMUST00000174227ENSMUST00000174297
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001X1_0001ENSDARG00000037997ENSDART00000055380ENSDARG00000037998ENSDART00000055381ENSDART00000104025CIL_0001X1_0002ENSMUSG00000001525ENSMUST00000001566ENSMUST00000173253ENSMUSG00000059714ENSMUST00000001569ENSMUST00000173147ENSMUST00000173628ENSMUST00000174080
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000037997 ENSDART00000055380 N/A N/A N/A 64.988±20.64 N/A N/A 0.613±0.29 3.535±0.85 0.269±0.00 N/A 2.177±0.00 N/A N/A N/A
ENSDARG00000037998 ENSDART00000055381 N/A N/A N/A 11.526±4.88 N/A N/A 38.706±6.76 9.119±5.43 N/A N/A N/A N/A N/A N/A
ENSDART00000104025 N/A N/A N/A 8.883±2.29 N/A N/A 40.068±6.61 11.954±4.18 0.993±0.00 N/A 10.790±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001525 ENSMUST00000001566 91.922±44.11 93.876±2.55 96.772±11.26 591.399±499.96 169.882±85.85 98.316±42.41 19.323±2.07 22.224±2.32 124.870±143.29 49.232±7.80 8.934±2.40 246.408±73.41 229.364±141.31 10.034±4.15
ENSMUST00000134978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173253 N/A N/A N/A N/A 52.755±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000059714 ENSMUST00000001569 40.331±12.05 34.917±2.96 55.101±8.02 22.433±4.11 27.635±11.28 28.130±2.22 61.646±5.57 20.790±1.16 15.544±4.97 41.748±3.18 24.488±4.80 27.724±4.38 18.516±0.95 4.779±1.38
ENSMUST00000172846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173147 N/A N/A N/A N/A 9.809±0.00 N/A N/A N/A N/A N/A N/A 15.874±0.88 N/A N/A
ENSMUST00000173273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173628 N/A N/A 21.098±4.70 117.909±0.00 N/A N/A N/A N/A 6.557±0.00 N/A N/A 27.183±31.34 40.872±36.88 3.214±0.00
ENSMUST00000174080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.471±1.21 N/A N/A
ENSMUST00000174227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading