C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transglutaminase 1, K polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002389 Tgm1-201 ENSMUSG00000022218 10090 - 14:55700009-55713088 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyOvaryTestisENSMUST00000002389
Transcript ID Adrenal Colon Kidney Ovary Testis
ENSMUST00000002389 0.159±0.02 0.242±0.00 1.947±0.31 0.584±0.24 0.327±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SE CIL_0001SE_0002 CGP 14:55679083-55713492
CIL_0001SH CIL_0001SH_0002 CGP 14:55700009-55722257

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003810 IEA protein-glutamine gamma-glutamyltransferase activity
GO:0005913 IDA cell-cell adherens junction
GO:0009887 IMP organ morphogenesis
GO:0018149 IEA peptide cross-linking
GO:0019538 TAS protein metabolic process
GO:0031424 IEA keratinization
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000206765 TGM1-001 protein_coding Homo_sapiens 0 2639
ENST00000544573 TGM1-002 protein_coding Homo_sapiens 0 1424
ENST00000558074 TGM1-008 protein_coding Homo_sapiens 0 211
ENST00000559136 TGM1-009 protein_coding Homo_sapiens 0 1026

Loading