C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transglutaminase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544573 TGM1-002 ENSG00000092295 9606 - 14:24249208-24263180 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000544573
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000544573 0.037±0.00 0.169±0.00 0.549±0.00 0.217±0.08 0.206±0.00 0.049±0.00 0.625±0.00 0.040±0.00 0.348±0.00 0.013±0.00 11.631±9.17 1.035±0.00 0.409±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SE CIL_0001SE_0001 CGP 14:24239643-24264432
CIL_0001SH CIL_0001SH_0001 CGP 14:24249114-24271739

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003810 IEA protein-glutamine gamma-glutamyltransferase activity
GO:0018149 IEA peptide cross-linking

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002389 Tgm1-201 protein_coding Mus_musculus 0 1424
ENSMUST00000178034 Tgm1-203 protein_coding Mus_musculus 0 1424
ENSMUST00000168729 Tgm1-202 protein_coding Mus_musculus 0 1424

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