C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transglutaminase 1, K polypeptide
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022218 Tgm1 10090 - 14:55700009-55713492 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002389 Tgm1-201 55700009-55713088 protein_coding
  ENSMUST00000168729 Tgm1-202 55700009-55713492 protein_coding
  ENSMUST00000178034 Tgm1-203 55700009-55713492 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002389ENSMUST00000168729ENSMUST00000178034
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002389 N/A 0.159±0.02 N/A N/A N/A 0.242±0.00 N/A 1.947±0.31 N/A N/A N/A 0.584±0.24 N/A 0.327±0.00
ENSMUST00000168729 N/A N/A N/A N/A 0.935±0.22 0.069±0.02 N/A N/A 1.367±0.72 N/A N/A N/A N/A 0.245±0.00
ENSMUST00000178034 0.504±0.28 0.182±0.00 0.341±0.05 0.232±0.13 3.506±0.81 0.254±0.13 0.097±0.04 10.709±1.67 7.147±3.86 5.948±4.72 0.099±0.13 0.582±0.27 56.949±20.70 0.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SE CIL_0001SE_0002 CGP 14:55679083-55713492
CIL_0001SH CIL_0001SH_0002 CGP 14:55700009-55722257

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003810 IEA protein-glutamine gamma-glutamyltransferase activity
GO:0005515 IEA protein binding
GO:0005913 IDA cell-cell adherens junction
GO:0009887 IMP organ morphogenesis
GO:0018149 IEA peptide cross-linking
GO:0019538 TAS protein metabolic process
GO:0030216 IEA keratinocyte differentiation
GO:0031224 IEA intrinsic component of membrane
GO:0031424 IEA keratinization
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005913 TGM1 (1 of 6) transglutaminase 1 protein_coding Danio_rerio
ENSDARG00000012130 tgm1l1 transglutaminase 1 like 1 protein_coding Danio_rerio
ENSDARG00000017799 tgm1 transglutaminase 1, K polypeptide protein_coding Danio_rerio
ENSDARG00000019024 tgm1l2 transglutaminase 1 like 2 protein_coding Danio_rerio
ENSDARG00000040569 tgm1l4 transglutaminase 1 like 4 protein_coding Danio_rerio
ENSDARG00000044084 TGM1 (6 of 6) transglutaminase 1 protein_coding Danio_rerio
ENSG00000092295 TGM1 transglutaminase 1 protein_coding Homo_sapiens

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