C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hemopoietic cell kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003370 Hck-002 ENSMUSG00000003283 10090 + 2:153108468-153151441 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003370
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003370 3.939±2.04 0.935±0.27 0.697±0.00 0.422±0.00 7.587±2.20 3.515±0.23 0.192±0.10 0.343±0.09 2.694±3.60 15.583±3.27 0.085±0.13 2.634±2.08 0.203±0.16 0.066±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008N4 CIL_0008N4_0002 VISTA 2:152517372-153118197
CIL_0004A2 CIL_0004A2_0002 CGP 2:153065955-153151441
CIL_00071A CIL_00071A_0003 CGP 2:153108468-153210466

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004713 IEA protein tyrosine kinase activity
GO:0005524 IEA ATP binding
GO:0006909 IMP phagocytosis
GO:0018108 IEA peptidyl-tyrosine phosphorylation
GO:0050830 IGI defense response to Gram-positive bacterium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000081536 hck-201 protein_coding Danio_rerio 0 651
ENSDART00000135787 hck-001 protein_coding Danio_rerio 0 651
ENST00000262651 HCK-005 nonsense_mediated_decay Homo_sapiens 0 1664
ENST00000375852 HCK-001 protein_coding Homo_sapiens 0 1744
ENST00000375862 HCK-002 protein_coding Homo_sapiens 0 1757
ENST00000486475 HCK-004 nonsense_mediated_decay Homo_sapiens 0 1668
ENST00000518730 HCK-007 protein_coding Homo_sapiens 0 1757
ENST00000520553 HCK-006 protein_coding Homo_sapiens 0 1744
ENST00000534862 HCK-201 protein_coding Homo_sapiens 0 1744
ENST00000538448 HCK-202 protein_coding Homo_sapiens 0 1668

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