C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB3A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000464076 RAB3A-002 ENSG00000105649 9606 - 19:18196799-18204042 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLungENST00000464076
Transcript ID Colon Heart Lung
ENST00000464076 1.663±0.00 0.486±0.00 0.119±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DR CIL_0004DR_0002 CGP 19:18173162-18196948

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003502 Rab3b-003 protein_coding Mus_musculus 0 322
ENSMUST00000106650 Rab3b-001 protein_coding Mus_musculus 0 322
ENSMUST00000106651 Rab3b-002 protein_coding Mus_musculus 0 228
ENSDART00000062820 rab3b-201 protein_coding Danio_rerio 3.9937e-43 180
ENSDART00000143376 rab3b-001 protein_coding Danio_rerio 3.9937e-43 180
ENSMUST00000034301 Rab3a-001 protein_coding Mus_musculus 0.000000000005 77
ENSMUST00000110092 Rab3a-002 protein_coding Mus_musculus 0.000000000006 77
ENSMUST00000110090 Rab3a-003 protein_coding Mus_musculus 0.000000000005 77
ENSMUST00000110093 Rab3a-004 protein_coding Mus_musculus 0.000000000006 77

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