C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003521 Rps11-201 ENSMUSG00000003429 10090 - 7:45122388-45124389 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003521
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003521 216.557±54.20 61.420±7.62 506.193±48.13 179.112±83.30 172.371±81.12 146.390±32.02 99.227±5.41 137.780±30.50 194.913±153.97 121.610±24.04 207.026±17.94 285.819±325.30 438.034±248.60 94.124±28.73

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IEA osteoblast differentiation
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IEA protein binding
GO:0005925 IEA focal adhesion
GO:0006412 IEA translation
GO:0016020 IEA membrane
GO:0019843 IEA rRNA binding
GO:0022627 IEA cytosolic small ribosomal subunit
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000270625 RPS11-001 protein_coding Homo_sapiens 0 654
ENST00000594493 RPS11-003 protein_coding Homo_sapiens 0 604
ENST00000596873 RPS11-006 protein_coding Homo_sapiens 0 492
ENST00000599167 RPS11-004 retained_intron Homo_sapiens 0 340
ENST00000599561 RPS11-008 protein_coding Homo_sapiens 0 359
ENST00000600027 RPS11-005 retained_intron Homo_sapiens 0 340
ENST00000601216 RPS11-007 retained_intron Homo_sapiens 0 281
ENST00000601306 RPS11-009 nonsense_mediated_decay Homo_sapiens 0 603
ENST00000602252 RPS11-002 retained_intron Homo_sapiens 0 444

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