C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000601306 RPS11-009 ENSG00000142534 9606 + 19:49496466-49499688 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverLungMuscleOvaryPlacentaENST00000601306
Transcript ID Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000601306 14.542±0.00 118.887±0.00 347.500±0.00 994.816±0.00 352.858±269.68 4089.020±0.00 2361.945±635.68

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003521 Rps11-201 protein_coding Mus_musculus 0 603
ENSMUST00000121547 Rps11-ps2-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000062226 Rps11-ps4-001 processed_pseudogene Mus_musculus 0 484
ENSMUST00000117608 Rps11-ps3-001 processed_pseudogene Mus_musculus 0 442
ENSDART00000134524 rps11-002 processed_transcript Danio_rerio 0 388
ENSDART00000075028 rps11-001 protein_coding Danio_rerio 0 388
ENSMUST00000117302 Rps11-ps5-001 processed_pseudogene Mus_musculus 0 379
ENSMUST00000138868 Ccdc174-003 retained_intron Mus_musculus 0 219

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