C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000596873 RPS11-006 ENSG00000142534 9606 + 19:49496432-49498251 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000596873
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000596873 33.104±0.00 139.099±0.00 91.646±0.00 83.488±0.00 45.974±0.00 84.371±0.00 129.573±0.00 98.720±0.00 130.385±0.00 197.531±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003521 Rps11-201 protein_coding Mus_musculus 0 492
ENSMUST00000117608 Rps11-ps3-001 processed_pseudogene Mus_musculus 0 390
ENSMUST00000121547 Rps11-ps2-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000062226 Rps11-ps4-001 processed_pseudogene Mus_musculus 0 377
ENSDART00000075028 rps11-001 protein_coding Danio_rerio 0 307
ENSDART00000134524 rps11-002 processed_transcript Danio_rerio 0 281
ENSMUST00000117302 Rps11-ps5-001 processed_pseudogene Mus_musculus 0 278

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