C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000599561 RPS11-008 ENSG00000142534 9606 + 19:49496454-49499689 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyTestisENST00000599561
Transcript ID Adipose Adrenal Breast Colon Kidney Testis
ENST00000599561 1879.820±0.00 2865.570±0.00 2050.030±0.00 893.922±0.00 171.759±0.00 734.305±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003521 Rps11-201 protein_coding Mus_musculus 0 359
ENSMUST00000062226 Rps11-ps4-001 processed_pseudogene Mus_musculus 0 287
ENSDART00000134524 rps11-002 processed_transcript Danio_rerio 0 274
ENSDART00000075028 rps11-001 protein_coding Danio_rerio 0 274
ENSMUST00000117302 Rps11-ps5-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000138868 Ccdc174-003 retained_intron Mus_musculus 3e-29 132

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