C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SRSF protein kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000423325 SRPK1-002 ENSG00000096063 9606 - 6:35833034-35921147 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyLiverLungOvaryPlacentaENST00000423325
Transcript ID Adipose Breast Kidney Liver Lung Ovary Placenta
ENST00000423325 1.773±0.00 1.033±0.00 1.223±0.00 1.330±0.00 1.930±0.00 0.904±0.00 1.066±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002O1 CIL_0002O1_0001 CGP 6:35794982-35833874
CIL_0002O2 CIL_0002O2_0001 CGP 6:35805293-35921342
CIL_0002O7 CIL_0002O7_0001 CGP 6:35832966-36024868

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006468 IEA protein phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130643 Srpk1-001 protein_coding Mus_musculus 0 2514
ENSMUST00000004987 Srpk1-002 nonsense_mediated_decay Mus_musculus 0 1160
ENSMUST00000120768 Gm8876-001 processed_pseudogene Mus_musculus 0 1098
ENSMUST00000145023 Srpk1-003 retained_intron Mus_musculus 0 904
ENSMUST00000136504 Srpk1-007 retained_intron Mus_musculus 0 462
ENSMUST00000126683 Srpk1-004 retained_intron Mus_musculus 0 368
ENSMUST00000145730 Srpk1-006 retained_intron Mus_musculus 0 261
ENSMUST00000114767 Srpk1-005 protein_coding Mus_musculus 0 209

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