| Transcript ID | Colon |
|---|---|
| ENST00000268679 | 0.073±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000268679  |
CBFA2T3-001 |
ENSG00000129993 |
9606 | - |
16:88874858-88977204  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00091T | CIL_00091T_0001 | VISTA | 16:88690989-89294615 |
| CIL_0006AK | CIL_0006AK_0002 | CGP | 16:88863333-88977204 |
| CIL_0006AJ | CIL_0006AJ_0002 | CGP | 16:88874858-89155846 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003682 | IEA | chromatin binding |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005515 | IPI | protein binding |
| GO:0005622 | IEA | intracellular |
| GO:0005634 | IEA | nucleus |
| GO:0005794 | IEA | Golgi apparatus |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0008283 | TAS | cell proliferation |
| GO:0016020 | IEA | membrane |
| GO:0030851 | IDA | granulocyte differentiation |
| GO:0045944 | IEA | positive regulation of transcription from RNA polymerase II promoter |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000064674
|
Cbfa2t3-002 | protein_coding | Mus_musculus | 0 | 1679 |
|
ENSMUST00000127984
|
Cbfa2t3-001 | protein_coding | Mus_musculus | 0 | 1679 |
|
ENSMUST00000006525
|
Cbfa2t3-003 | protein_coding | Mus_musculus | 0 | 1450 |
|
ENSMUST00000134045
|
Cbfa2t3-005 | protein_coding | Mus_musculus | 0 | 630 |
|
ENSMUST00000105566
|
Runx1t1-201 | protein_coding | Mus_musculus | 0 | 584 |
|
ENSMUST00000098256
|
Runx1t1-004 | protein_coding | Mus_musculus | 0 | 584 |
|
ENSMUST00000098257
|
Runx1t1-003 | protein_coding | Mus_musculus | 0 | 584 |
|
ENSMUST00000006761
|
Runx1t1-001 | protein_coding | Mus_musculus | 0 | 584 |
|
ENSMUST00000142535
|
Cbfa2t3-007 | processed_transcript | Mus_musculus | 0 | 398 |
|
ENSMUST00000147374
|
Cbfa2t3-006 | processed_transcript | Mus_musculus | 0 | 351 |
|
ENSMUST00000148630
|
Cbfa2t3-004 | retained_intron | Mus_musculus | 5e-38 | 161 |
