C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor II H, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006774 Gtf2h1-001 ENSMUSG00000006599 10090 + 7:46796103-46823800 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006774
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006774 5.993±0.37 11.382±1.79 11.732±0.54 13.600±2.80 4.273±1.35 6.076±0.88 2.856±0.49 6.636±0.24 7.883±4.84 5.078±0.68 4.224±0.93 6.296±1.15 23.072±4.81 16.385±5.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041D CIL_00041D_0003 CGP 7:46760466-46823800
CIL_000445 CIL_000445_0002 CGP 7:46796103-46855627

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000439 IEA core TFIIH complex
GO:0004672 IEA protein kinase activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005675 IEA holo TFIIH complex
GO:0006200 IEA ATP catabolic process
GO:0006289 IEA nucleotide-excision repair
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0006468 IEA protein phosphorylation
GO:0008094 IEA DNA-dependent ATPase activity
GO:0008353 IEA RNA polymerase II carboxy-terminal domain kinase activity
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265963 GTF2H1-001 protein_coding Homo_sapiens 0 2643
ENST00000418116 GTF2H1-017 retained_intron Homo_sapiens 0 2261
ENST00000453096 GTF2H1-002 protein_coding Homo_sapiens 0 2427
ENST00000524753 GTF2H1-014 protein_coding Homo_sapiens 0 798
ENST00000525831 GTF2H1-006 protein_coding Homo_sapiens 0 414
ENST00000526282 GTF2H1-013 retained_intron Homo_sapiens 0 477
ENST00000526461 GTF2H1-007 retained_intron Homo_sapiens 0 316
ENST00000526630 GTF2H1-011 protein_coding Homo_sapiens 0 846
ENST00000528427 GTF2H1-012 retained_intron Homo_sapiens 0 315
ENST00000530496 GTF2H1-010 protein_coding Homo_sapiens 0 1258
ENST00000531757 GTF2H1-004 processed_transcript Homo_sapiens 0 451
ENST00000532227 GTF2H1-008 retained_intron Homo_sapiens 0 246
ENST00000534213 GTF2H1-005 processed_transcript Homo_sapiens 3e-26 122
ENST00000534641 GTF2H1-003 protein_coding Homo_sapiens 0 2115
ENST00000543932 GTF2H1-018 retained_intron Homo_sapiens 0 1175
ENST00000585803 RP11-795H16.2-001 processed_pseudogene Homo_sapiens 0 1786
ENST00000607664 GTF2H1-019 retained_intron Homo_sapiens 3e-21 106

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