C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: general transcription factor II H, polypeptide 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006599 Gtf2h1 10090 + 7:46796103-46823800 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006774 Gtf2h1-001 46796103-46823800 protein_coding
  ENSMUST00000107644 Gtf2h1-002 46796671-46823275 protein_coding
  ENSMUST00000128420 Gtf2h1-003 46801687-46822909 nonsense_mediated_decay
  ENSMUST00000144708 Gtf2h1-004 46808452-46815418 retained_intron
  ENSMUST00000165031 Gtf2h1-005 46796114-46805027 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006774ENSMUST00000107644ENSMUST00000128420ENSMUST00000165031
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006774 5.993±0.37 11.382±1.79 11.732±0.54 13.600±2.80 4.273±1.35 6.076±0.88 2.856±0.49 6.636±0.24 7.883±4.84 5.078±0.68 4.224±0.93 6.296±1.15 23.072±4.81 16.385±5.87
ENSMUST00000107644 N/A N/A N/A 7.820±0.00 1.315±0.00 N/A 0.532±0.00 N/A N/A N/A N/A 4.774±2.32 22.019±6.59 25.842±0.00
ENSMUST00000128420 N/A N/A N/A N/A 2.081±0.00 N/A N/A N/A N/A N/A 1.598±0.00 N/A N/A N/A
ENSMUST00000165031 N/A 14.511±1.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.190±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041D CIL_00041D_0003 CGP 7:46760466-46823800
CIL_000445 CIL_000445_0002 CGP 7:46796103-46855627

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000439 IEA core TFIIH complex
GO:0004672 IEA protein kinase activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005675 IEA holo TFIIH complex
GO:0006200 IEA ATP catabolic process
GO:0006289 IEA nucleotide-excision repair
GO:0006351 IEA transcription, DNA-templated
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0006468 IEA protein phosphorylation
GO:0008094 IEA DNA-dependent ATPase activity
GO:0008353 IEA RNA polymerase II carboxy-terminal domain kinase activity
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026701 gtf2h1 general transcription factor II H, polypeptide 1 protein_coding Danio_rerio
ENSDARG00000095079 gtf2h1 general transcription factor II H, polypeptide 1 protein_coding Danio_rerio
ENSG00000110768 GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa protein_coding Homo_sapiens

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