C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | vacuolar protein sorting 25 (yeast) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000007533  |
Vps25-002 |
ENSMUSG00000078656 |
10090 | + |
11:101253707-101258049  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004IN | CIL_0004IN_0002 | CGP | 11:101191115-101259546 |
| CIL_0004JZ | CIL_0004JZ_0002 | CGP | 11:101246028-101259549 |
| CIL_0004HC | CIL_0004HC_0002 | CGP | 11:101253707-101277409 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005739 | IDA | mitochondrion |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0015031 | IEA | protein transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000253794
|
VPS25-001 | protein_coding | Homo_sapiens | 0 | 658 |
|
ENST00000455691
|
VPS25P1-001 | processed_pseudogene | Homo_sapiens | 0 | 375 |
|
ENST00000589219
|
VPS25-006 | retained_intron | Homo_sapiens | 0 | 409 |
|
ENST00000589520
|
VPS25-005 | protein_coding | Homo_sapiens | 0 | 329 |
|
ENST00000589577
|
VPS25-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 333 |
|
ENST00000590339
|
VPS25-002 | protein_coding | Homo_sapiens | 0 | 532 |
|
ENST00000591584
|
VPS25-003 | retained_intron | Homo_sapiens | 0 | 348 |
