C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: torsin family 2, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496460 TOR2A-007 ENSG00000160404 9606 - 9:127731844-127735313 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonMuscleOvaryPlacentaENST00000496460
Transcript ID Adrenal Bladder Brain Colon Muscle Ovary Placenta
ENST00000496460 7.749±0.00 0.607±0.00 3.464±0.00 2.303±0.00 1.278±0.00 18.845±0.00 5.224±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0001 VISTA 9:127227593-127829012
CIL_00075N CIL_00075N_0001 CGP 9:127716066-127735317
CIL_0002CG CIL_0002CG_0002 CGP 9:127731524-127778741

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175763 Tor2a-009 nonsense_mediated_decay Mus_musculus 0 778
ENSMUST00000149720 Tor2a-007 retained_intron Mus_musculus 0 573
ENSMUST00000009707 Tor2a-001 protein_coding Mus_musculus 0 573
ENSMUST00000156617 Tor2a-002 nonsense_mediated_decay Mus_musculus 0 562
ENSMUST00000140999 Tor2a-003 protein_coding Mus_musculus 0 414
ENSMUST00000149987 Tor2a-006 retained_intron Mus_musculus 0 361

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