C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | trafficking protein particle complex 2-like | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000015157  |
Trappc2l-201 |
ENSMUSG00000015013 |
10090 | + |
8:122611626-122615588  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00091T | CIL_00091T_0002 | VISTA | 8:122411841-123013825 |
| CIL_000330 | CIL_000330_0002 | CGP | 8:122578238-122615588 |
| CIL_00032Z | CIL_00032Z_0002 | CGP | 8:122611626-122622739 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
| GO:0005737 | IEA | cytoplasm |
| GO:0005783 | IEA | endoplasmic reticulum |
| GO:0005794 | IEA | Golgi apparatus |
| GO:0006888 | IEA | ER to Golgi vesicle-mediated transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000301021
|
TRAPPC2L-001 | protein_coding | Homo_sapiens | 0 | 542 |
|
ENST00000561840
|
TRAPPC2L-011 | protein_coding | Homo_sapiens | 0 | 274 |
|
ENST00000562125
|
TRAPPC2L-006 | retained_intron | Homo_sapiens | 0 | 274 |
|
ENST00000562792
|
TRAPPC2L-012 | nonsense_mediated_decay | Homo_sapiens | 0 | 267 |
|
ENST00000563514
|
TRAPPC2L-014 | retained_intron | Homo_sapiens | 8.40779e-45 | 183 |
|
ENST00000564365
|
TRAPPC2L-003 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000564404
|
TRAPPC2L-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 265 |
|
ENST00000564547
|
TRAPPC2L-013 | retained_intron | Homo_sapiens | 0 | 279 |
|
ENST00000565205
|
TRAPPC2L-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 274 |
|
ENST00000565309
|
TRAPPC2L-009 | retained_intron | Homo_sapiens | 0 | 307 |
|
ENST00000565504
|
TRAPPC2L-002 | protein_coding | Homo_sapiens | 0 | 484 |
|
ENST00000567312
|
TRAPPC2L-004 | protein_coding | Homo_sapiens | 0 | 270 |
|
ENST00000567895
|
TRAPPC2L-010 | protein_coding | Homo_sapiens | 0 | 466 |
|
ENST00000568583
|
TRAPPC2L-008 | protein_coding | Homo_sapiens | 0 | 477 |
