C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 2-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000568583 TRAPPC2L-008 ENSG00000167515 9606 + 16:88857141-88861309 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENST00000568583
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENST00000568583 4.843±0.00 7.931±0.00 1.739±0.00 2.414±0.00 1.759±0.00 2.943±0.00 1.629±0.00 1.093±0.00 4.480±0.87 10.770±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091T CIL_00091T_0001 VISTA 16:88690989-89294615
CIL_0006AL CIL_0006AL_0002 CGP 16:88809339-88856970
CIL_000330 CIL_000330_0001 CGP 16:88813734-88862686
CIL_00032Z CIL_00032Z_0001 CGP 16:88856220-88866660

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0005801 IEA cis-Golgi network
GO:0006810 IEA transport
GO:0006888 IEA ER to Golgi vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015157 Trappc2l-201 protein_coding Mus_musculus 0 477

Loading