C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 2-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000561840 TRAPPC2L-011 ENSG00000167515 9606 + 16:88857168-88861049 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLungMuscleOvaryENST00000561840
Transcript ID Adrenal Brain Breast Colon Heart Lung Muscle Ovary
ENST00000561840 15.691±0.00 11.826±0.00 8.611±6.28 10.343±0.00 10.936±0.00 20.634±0.00 4.478±2.67 24.618±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091T CIL_00091T_0001 VISTA 16:88690989-89294615
CIL_0006AL CIL_0006AL_0002 CGP 16:88809339-88856970
CIL_000330 CIL_000330_0001 CGP 16:88813734-88862686
CIL_00032Z CIL_00032Z_0001 CGP 16:88856220-88866660

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0005801 IEA cis-Golgi network
GO:0006810 IEA transport
GO:0006888 IEA ER to Golgi vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015157 Trappc2l-201 protein_coding Mus_musculus 0 274

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