C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 2-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000301021 TRAPPC2L-001 ENSG00000167515 9606 + 16:88857086-88862686 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyMuscleOvaryPlacentaTestisENST00000301021
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000301021 2.023±0.00 4.972±0.00 3.835±0.72 1.619±0.98 2.146±0.00 1.404±1.23 3.462±0.00 0.636±0.00 5.732±3.84 6.899±0.83 11.046±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091T CIL_00091T_0001 VISTA 16:88690989-89294615
CIL_0006AL CIL_0006AL_0002 CGP 16:88809339-88856970
CIL_000330 CIL_000330_0001 CGP 16:88813734-88862686
CIL_00032Z CIL_00032Z_0001 CGP 16:88856220-88866660

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005801 IEA cis-Golgi network
GO:0006810 IEA transport
GO:0006888 IEA ER to Golgi vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015157 Trappc2l-201 protein_coding Mus_musculus 0 542

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