C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: teneurin transmembrane protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422452 TENM1-201 ENSG00000009694 9606 - X:124375908-124963817 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyENST00000422452
Transcript ID Brain Kidney
ENST00000422452 0.926±0.00 2.973±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GB CIL_0000GB_0002 CGP X:123859724-124422664
CIL_0007YQ CIL_0007YQ_0001 VISTA X:123916977-124518737
CIL_0000AX CIL_0000AX_0001 CGP X:123960212-124422664
CIL_0000AW CIL_0000AW_0001 CGP X:124346344-124963817

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 TAS extracellular region
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0005794 ISS Golgi apparatus
GO:0005856 ISS cytoskeleton
GO:0005886 ISS plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006359 ISS regulation of transcription from RNA polymerase III promoter
GO:0006950 IEA response to stress
GO:0006955 TAS immune response
GO:0007165 IEA signal transduction
GO:0007218 IEA neuropeptide signaling pathway
GO:0007399 TAS nervous system development
GO:0008201 TAS heparin binding
GO:0008285 TAS negative regulation of cell proliferation
GO:0016021 IEA integral component of membrane
GO:0016363 ISS nuclear matrix
GO:0016607 ISS nuclear speck
GO:0030838 ISS positive regulation of actin filament polymerization
GO:0033138 ISS positive regulation of peptidyl-serine phosphorylation
GO:0042803 ISS protein homodimerization activity
GO:0043406 ISS positive regulation of MAP kinase activity
GO:0046982 ISS protein heterodimerization activity
GO:0048471 ISS perinuclear region of cytoplasm
GO:0051491 ISS positive regulation of filopodium assembly
GO:0090316 ISS positive regulation of intracellular protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016294 Tenm1-201 protein_coding Mus_musculus 0 11360
ENSMUST00000115059 Tenm1-001 protein_coding Mus_musculus 0 11360
ENSMUST00000115058 Tenm1-005 protein_coding Mus_musculus 0 11230
ENSMUST00000154433 Tenm1-004 retained_intron Mus_musculus 0 2180
ENSMUST00000126161 Tenm1-002 retained_intron Mus_musculus 0 1465
ENSMUST00000101619 Sh2d1a-007 retained_intron Mus_musculus 0 1138

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