C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GH3 domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000587427 GHDC-001 ENSG00000167925 9606 - 17:42189089-42194484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000587427
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000587427 7.015±0.00 18.849±0.00 0.626±0.00 1.794±0.55 6.062±5.92 1.522±0.95 1.185±1.11 4.070±0.00 3.785±3.33 6.172±0.00 2.801±2.58 12.127±7.12 18.982±2.13 6.038±4.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DQ CIL_0006DQ_0001 CGP 17:42184060-42194532
CIL_0000KW CIL_0000KW_0002 CGP 17:42188799-42276707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017891 Ghdc-001 protein_coding Mus_musculus 0 1245

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