C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 33A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000018399 Krt33a-001 ENSMUSG00000035592 10090 - 11:100011195-100016212 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderLungMuscleOvaryPlacentaTestisENSMUST00000018399
Transcript ID Adipose Bladder Lung Muscle Ovary Placenta Testis
ENSMUST00000018399 0.023±0.01 0.033±0.02 0.022±0.00 1.622±0.00 0.090±0.03 0.038±0.03 0.016±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000Y CGP 11:100011195-100029868

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005882 IEA intermediate filament
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000007735 KRT33A-001 protein_coding Homo_sapiens 0 1450
ENST00000246639 KRT35-001 protein_coding Homo_sapiens 0 929
ENST00000246646 KRT38-001 protein_coding Homo_sapiens 0 453
ENST00000251645 KRT31-001 protein_coding Homo_sapiens 0 1367
ENST00000251646 KRT33B-001 protein_coding Homo_sapiens 0 1423
ENST00000393989 KRT35-201 protein_coding Homo_sapiens 0 929
ENST00000394001 KRT34-001 protein_coding Homo_sapiens 0 1277
ENST00000570596 KRT33B-001 protein_coding Homo_sapiens 0 1423
ENST00000571312 RP1-18F17.1-001 protein_coding Homo_sapiens 0 1282
ENST00000573281 KRT31-001 protein_coding Homo_sapiens 0 1367
ENST00000576236 KRT33A-001 protein_coding Homo_sapiens 0 1450
ENST00000576522 AC004231.7-001 protein_coding Homo_sapiens 0 1277
ENST00000620421 KRT33B-201 protein_coding Homo_sapiens 0 1421

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