C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 33B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620421 KRT33B-201 ENSG00000131738 9606 - 17:41363811-41397592 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_0008 CGP 17:41346092-41397592
CIL_00056U CIL_00056U_000E CGP 17:41363494-41397592

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018399 Krt33a-001 protein_coding Mus_musculus 0 1421
ENSMUST00000073890 Krt33b-001 protein_coding Mus_musculus 0 1417
ENSMUST00000007318 Krt31-001 protein_coding Mus_musculus 0 1369
ENSMUST00000056362 Krt34-001 protein_coding Mus_musculus 0 1358
ENSMUST00000107419 Krt32-001 protein_coding Mus_musculus 0 693
ENSMUST00000138756 Krt33a-002 processed_transcript Mus_musculus 0 372
ENSMUST00000126460 Krt19-002 processed_transcript Mus_musculus 0 198
ENSMUST00000007317 Krt19-001 protein_coding Mus_musculus 0 198
ENSMUST00000125888 Krt19-003 processed_transcript Mus_musculus 3e-19 100
ENSDART00000105024 cyt1l-201 protein_coding Danio_rerio 1e-18 99
ENSDART00000142096 cyt1l-003 nonsense_mediated_decay Danio_rerio 1e-18 99
ENSDART00000105036 cyt1l-001 protein_coding Danio_rerio 1e-18 99
ENSDART00000105806 cyt1-201 protein_coding Danio_rerio 5e-17 94
ENSDART00000133032 cyt1-004 nonsense_mediated_decay Danio_rerio 5e-17 94
ENSDART00000004812 cyt1-001 protein_coding Danio_rerio 5e-17 94
ENSDART00000138392 cyt1-002 retained_intron Danio_rerio 5e-17 94
ENSDART00000105034 cyt1l-002 retained_intron Danio_rerio 0.000000000001 79
ENSDART00000105004 krt17-001 protein_coding Danio_rerio 0.000000003 68
ENSDART00000105803 KRT23 (1 of 2)-201 protein_coding Danio_rerio 0.00000001 66
ENSDART00000151326 krt17-002 protein_coding Danio_rerio 0.000002 58

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