C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: POC1 centriolar protein B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000549035 POC1B-005 ENSG00000139323 9606 - 12:89420896-89525563 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyMuscleTestisENST00000549035
Transcript ID Kidney Muscle Testis
ENST00000549035 1.253±0.00 0.878±0.00 9.026±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000213 CIL_000213_0002 CGP 12:89347232-89526024
CIL_0002EZ CIL_0002EZ_0001 CGP 12:89419718-89526262

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IDA spindle pole
GO:0005515 IPI:IEA protein binding
GO:0005813 IDA centrosome
GO:0005814 IDA centriole
GO:0008283 IMP cell proliferation
GO:0036064 IDA ciliary basal body
GO:0042384 IMP cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159990 Poc1b-003 protein_coding Mus_musculus 0 1219
ENSMUST00000020113 Poc1b-001 protein_coding Mus_musculus 0 1199
ENSMUST00000159228 Poc1b-002 protein_coding Mus_musculus 0 911
ENSMUST00000159043 Poc1b-004 nonsense_mediated_decay Mus_musculus 0 551

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