C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB36, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263116 RAB36-001 ENSG00000100228 9606 + 22:23145326-23164350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263116
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263116 1.712±0.00 1.394±0.00 1.718±0.39 1.301±0.00 0.110±0.00 0.137±0.13 3.445±0.00 0.412±0.32 1.797±0.70 0.081±0.06 3.599±0.73 2.283±0.57 1.656±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RX CIL_0002RX_0001 CGP 22:23070361-23164350
CIL_0002X0 CIL_0002X0_0001 CGP 22:23145326-23318037

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146440 Rab36-005 protein_coding Mus_musculus 0 832
ENSMUST00000020391 Rab36-002 protein_coding Mus_musculus 0 832
ENSMUST00000147802 Rab36-001 protein_coding Mus_musculus 0 832
ENSMUST00000151432 Rab36-008 retained_intron Mus_musculus 0 470
ENSMUST00000136944 Rab36-003 retained_intron Mus_musculus 0 470
ENSMUST00000142507 Rab36-004 retained_intron Mus_musculus 0 377
ENSMUST00000122815 Rab36-006 retained_intron Mus_musculus 0 322
ENSMUST00000139384 Rab36-007 protein_coding Mus_musculus 0 261

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