C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 20, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020938 Fam20a-001 ENSMUSG00000020614 10090 - 11:109672926-109722256 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000020938
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000020938 6.202±0.27 1.768±0.54 4.343±0.51 1.744±1.04 4.069±1.58 2.127±0.17 1.809±0.34 2.329±0.29 7.745±3.84 5.417±0.46 0.496±0.10 4.743±1.26 1.205±0.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AG CIL_0003AG_0003 CGP 11:109649405-109722279

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005623 IDA cell
GO:0005794 IDA Golgi apparatus
GO:0044691 IEA tooth eruption
GO:0055074 IEA calcium ion homeostasis
GO:0070062 IEA extracellular vesicular exosome
GO:0070166 IMP enamel mineralization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000226094 FAM20A-003 processed_transcript Homo_sapiens 0 854
ENST00000590074 FAM20A-002 nonsense_mediated_decay Homo_sapiens 0 1310
ENST00000590873 FAM20A-005 nonsense_mediated_decay Homo_sapiens 0.00000000004 73
ENST00000592554 FAM20A-001 protein_coding Homo_sapiens 0 1731
ENST00000592847 FAM20A-004 processed_transcript Homo_sapiens 0 880

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