C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), gamma 2, accessory subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021060 Polg2-001 ENSMUSG00000020718 10090 - 11:106768253-106779515 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021060
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021060 1.409±0.26 2.308±0.60 1.014±0.43 1.548±0.43 3.671±2.05 0.883±0.32 1.638±0.80 1.740±0.70 1.885±0.00 0.976±0.33 2.263±0.37 1.266±0.12 0.815±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012N CIL_00012N_0002 CGP 11:106654217-106768794
CIL_0006GT CIL_0006GT_0002 CGP 11:106751226-106779537
CIL_00012I CIL_00012I_0002 CGP 11:106768253-106789185

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003887 IDA DNA-directed DNA polymerase activity
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0006260 IC DNA replication
GO:0006281 TAS DNA repair
GO:0042645 IEA mitochondrial nucleoid
GO:0042802 IPI identical protein binding
GO:0070062 IEA extracellular vesicular exosome
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000539111 POLG2-001 protein_coding Homo_sapiens 0 1218
ENST00000577506 POLG2-007 processed_transcript Homo_sapiens 0 385
ENST00000578687 POLG2-005 processed_transcript Homo_sapiens 0 300
ENST00000578997 POLG2-003 nonsense_mediated_decay Homo_sapiens 0 331
ENST00000580893 POLG2-004 processed_transcript Homo_sapiens 0 399
ENST00000581355 POLG2-006 protein_coding Homo_sapiens 0 466
ENST00000582501 POLG2-008 processed_transcript Homo_sapiens 0 372
ENST00000585104 POLG2-009 processed_transcript Homo_sapiens 6e-35 150
ENST00000585141 POLG2-002 retained_intron Homo_sapiens 0 878

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