C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006GT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000271605-ENSG00000256525 CGP 9606 17:64449037-64497036
GeneTranscriptPositionBiotype
ENSG00000256525 (POLG2)
polymerase (DNA directed), gamma 2, accessory subunit 		ENST00000539111 (POLG2-001) 64477785-64497036 protein_coding
ENST00000577506 (POLG2-007) 64480289-64490969 processed_transcript
ENST00000578687 (POLG2-005) 64486989-64492910 processed_transcript
ENST00000578997 (POLG2-003) 64490862-64496755 nonsense_mediated_decay
ENST00000580490 (POLG2-010) 64480348-64484230 processed_transcript
ENST00000580893 (POLG2-004) 64490469-64493021 processed_transcript
ENST00000581355 (POLG2-006) 64477787-64492720 protein_coding
ENST00000582501 (POLG2-008) 64477964-64487474 processed_transcript
ENST00000585104 (POLG2-009) 64481324-64485794 processed_transcript
ENST00000585141 (POLG2-002) 64485158-64497019 retained_intron
ENSG00000256826 (AC138744.2)
 ENST00000538774 (AC138744.2-001) 64491523-64491789 processed_pseudogene
ENSG00000271605 (MILR1)
mast cell immunoglobulin-like receptor 1 		ENST00000605096 (MILR1-001) 64465452-64468643 protein_coding
ENST00000612535 (MILR1-004) 64449169-64467617 protein_coding
ENST00000615220 (MILR1-003) 64449037-64467649 protein_coding
ENST00000616498 (MILR1-006) 64449169-64467617 protein_coding
ENST00000617071 (MILR1-005) 64449130-64457592 non_stop_decay
ENST00000619286 (MILR1-201) 64449115-64468642 protein_coding
ENST00000620304 (MILR1-002) 64465452-64467935 protein_coding
CIL_0006GT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040528-ENSMUSG00000020718 CGP 10090 11:106751226-106779537
GeneTranscriptPositionBiotype
ENSMUSG00000020718 (Polg2)
polymerase (DNA directed), gamma 2, accessory subunit 		ENSMUST00000021060 (Polg2-001) 106768253-106779515 protein_coding
ENSMUST00000126201 (Polg2-002) 106775515-106779502 nonsense_mediated_decay
ENSMUST00000127061 (Polg2-004) 106768253-106779537 nonsense_mediated_decay
ENSMUST00000134029 (Polg2-005) 106771044-106779473 nonsense_mediated_decay
ENSMUST00000142590 (Polg2-006) 106772642-106773850 retained_intron
ENSMUST00000155107 (Polg2-003) 106768733-106779473 nonsense_mediated_decay
ENSMUSG00000040528 (Milr1)
mast cell immunoglobulin like receptor 1 		ENSMUST00000086353 (Milr1-001) 106751240-106767568 protein_coding
ENSMUST00000106794 (Milr1-006) 106751268-106767765 protein_coding
ENSMUST00000147326 (Milr1-002) 106751226-106768794 protein_coding
ENSMUST00000182023 (Milr1-007) 106751268-106768717 nonsense_mediated_decay
ENSMUST00000182479 (Milr1-008) 106754943-106768720 protein_coding
ENSMUST00000182896 (Milr1-003) 106751240-106767145 protein_coding
ENSMUST00000182908 (Milr1-004) 106751240-106767145 protein_coding
ENSMUST00000183111 (Milr1-005) 106751265-106768719 protein_coding
ENSMUSG00000088400 (Gm25889)
predicted gene, 25889 		ENSMUST00000157775 (Gm25889-201) 106764635-106764741 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006GT_0001ENSG00000256525ENST00000539111ENST00000577506ENST00000578687ENST00000578997ENST00000580490ENST00000580893ENST00000581355ENST00000582501ENST00000585104ENST00000585141ENSG00000256826ENST00000538774ENSG00000271605ENST00000605096ENST00000612535ENST00000615220ENST00000616498ENST00000617071ENST00000619286ENST00000620304CIL_0006GT_0002ENSMUSG00000020718ENSMUST00000021060ENSMUST00000126201ENSMUST00000127061ENSMUST00000134029ENSMUST00000142590ENSMUST00000155107ENSMUSG00000040528ENSMUST00000086353ENSMUST00000106794ENSMUST00000147326ENSMUST00000182023ENSMUST00000182479ENSMUST00000182896ENSMUST00000182908ENSMUST00000183111ENSMUSG00000088400ENSMUST00000157775
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006GT_0001ENSG00000256525ENST00000539111ENST00000577506ENST00000578687ENST00000580490ENST00000581355ENST00000582501ENST00000585141ENSG00000256826ENST00000538774ENSG00000271605ENST00000605096ENST00000612535ENST00000615220ENST00000616498ENST00000617071ENST00000619286ENST00000620304CIL_0006GT_0002ENSMUSG00000020718ENSMUST00000021060ENSMUST00000126201ENSMUST00000127061ENSMUST00000134029ENSMUST00000155107ENSMUSG00000040528ENSMUST00000086353ENSMUST00000147326ENSMUST00000182023ENSMUSG00000088400ENSMUST00000157775
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000256525 ENST00000539111 1.647±0.00 1.501±0.00 N/A 0.407±0.00 1.866±0.00 N/A 1.318±0.00 N/A 0.419±0.16 N/A 1.449±0.00 4.184±1.76 0.789±0.06 12.249±6.39
ENST00000577506 N/A N/A N/A N/A N/A N/A 1.188±0.00 N/A 0.587±0.00 0.923±0.00 N/A N/A N/A N/A
ENST00000578687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.665±0.00 N/A N/A N/A
ENST00000578997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580490 N/A 4.656±0.00 N/A N/A N/A 1.122±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581355 N/A N/A N/A N/A N/A N/A N/A 1.183±0.00 N/A N/A N/A 1.776±0.00 N/A N/A
ENST00000582501 N/A 2.315±0.00 N/A N/A 0.812±0.00 0.258±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585141 0.498±0.00 2.110±0.00 0.330±0.00 N/A N/A 0.214±0.00 N/A 0.613±0.00 0.884±0.00 N/A N/A 1.312±0.00 0.292±0.04 1.303±0.00
ENSG00000256826 ENST00000538774 0.322±0.00 N/A N/A 0.529±0.00 0.495±0.00 N/A 0.444±0.00 0.140±0.00 N/A N/A N/A N/A 0.272±0.03 N/A
ENSG00000271605 ENST00000605096 N/A 4.522±0.00 N/A 0.345±0.00 0.596±0.00 N/A 0.400±0.18 N/A 0.134±0.00 N/A N/A N/A 3.277±1.10 0.421±0.12
ENST00000612535 N/A 3.865±0.00 N/A 0.187±0.00 0.486±0.00 0.372±0.00 0.377±0.00 0.486±0.19 0.578±0.32 0.720±0.00 0.678±0.00 0.100±0.00 N/A N/A
ENST00000615220 1.181±0.00 N/A N/A N/A 0.845±0.00 N/A N/A N/A N/A 1.086±0.39 N/A 0.614±0.21 1.228±0.53 0.103±0.00
ENST00000616498 N/A N/A N/A 0.383±0.00 0.674±0.00 0.200±0.00 N/A N/A N/A N/A N/A 0.618±0.00 N/A N/A
ENST00000617071 N/A N/A N/A N/A 1.217±0.00 0.504±0.00 N/A N/A 0.538±0.00 1.562±0.79 N/A N/A 4.849±0.00 0.410±0.00
ENST00000619286 0.909±0.00 2.884±0.00 N/A N/A 0.443±0.00 0.550±0.00 0.453±0.00 0.312±0.00 0.150±0.00 N/A N/A 0.676±0.19 2.023±0.97 0.331±0.00
ENST00000620304 1.218±0.00 N/A N/A 0.603±0.00 0.861±0.00 0.283±0.09 N/A 0.546±0.00 0.128±0.00 1.185±0.00 N/A 0.387±0.18 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020718 ENSMUST00000021060 1.409±0.26 N/A 2.308±0.60 1.014±0.43 1.548±0.43 3.671±2.05 0.883±0.32 1.638±0.80 1.740±0.70 1.885±0.00 0.976±0.33 2.263±0.37 1.266±0.12 0.815±0.15
ENSMUST00000126201 N/A 3.781±0.89 N/A N/A N/A 3.300±1.39 N/A N/A N/A N/A N/A 2.651±0.03 N/A N/A
ENSMUST00000127061 1.186±0.00 2.624±1.12 N/A 0.811±0.10 2.869±1.52 3.711±0.00 N/A 1.172±0.52 0.780±0.15 1.352±0.34 0.367±0.09 2.465±1.12 0.726±0.05 0.544±0.00
ENSMUST00000134029 0.617±0.00 0.786±0.05 1.214±0.00 0.765±0.44 1.957±0.71 1.858±0.52 0.593±0.06 1.011±0.32 1.101±0.46 1.881±0.15 0.266±0.11 1.703±0.31 0.704±0.27 0.624±0.32
ENSMUST00000142590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155107 0.860±0.18 N/A 1.162±0.00 0.569±0.25 1.838±0.00 N/A N/A 0.694±0.00 0.971±0.36 1.097±0.00 0.195±0.00 1.355±0.15 0.598±0.07 0.335±0.10
ENSMUSG00000040528 ENSMUST00000086353 N/A N/A 1.052±0.00 N/A 2.370±0.00 N/A N/A N/A 2.169±0.38 N/A 0.446±0.00 N/A N/A N/A
ENSMUST00000106794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147326 N/A N/A N/A N/A N/A N/A N/A N/A 1.492±0.00 N/A N/A N/A N/A N/A
ENSMUST00000182023 N/A N/A N/A N/A 0.986±0.00 N/A N/A N/A N/A 1.169±0.00 N/A N/A N/A N/A
ENSMUST00000182479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088400 ENSMUST00000157775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 65.667±0.00 N/A N/A

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