C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), gamma 2, accessory subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539111 POLG2-001 ENSG00000256525 9606 - 17:64477785-64497036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverMuscleOvaryPlacentaTestisENST00000539111
Transcript ID Adipose Adrenal Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENST00000539111 1.647±0.00 1.501±0.00 0.407±0.00 1.866±0.00 1.318±0.00 0.419±0.16 1.449±0.00 4.184±1.76 0.789±0.06 12.249±6.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GT CIL_0006GT_0001 CGP 17:64449037-64497036
CIL_00012I CIL_00012I_0001 CGP 17:64477785-64508199

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000262 TAS mitochondrial chromosome
GO:0003677 IEA DNA binding
GO:0003887 IEA DNA-directed DNA polymerase activity
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0006260 IEA:NAS DNA replication
GO:0006261 TAS DNA-dependent DNA replication
GO:0006281 IEA:NAS DNA repair
GO:0042645 IDA mitochondrial nucleoid
GO:0042802 IEA identical protein binding
GO:0070062 IDA extracellular vesicular exosome
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021060 Polg2-001 protein_coding Mus_musculus 0 1218
ENSMUST00000127061 Polg2-004 nonsense_mediated_decay Mus_musculus 0 876
ENSMUST00000134029 Polg2-005 nonsense_mediated_decay Mus_musculus 0 750
ENSMUST00000155107 Polg2-003 nonsense_mediated_decay Mus_musculus 0 745
ENSMUST00000142590 Polg2-006 retained_intron Mus_musculus 0 340
ENSMUST00000126201 Polg2-002 nonsense_mediated_decay Mus_musculus 0 302

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