C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00012I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000256525-ENSG00000108654 CGP 9606 17:64477785-64508199
GeneTranscriptPositionBiotype
ENSG00000108654 (DDX5)
DEAD (Asp-Glu-Ala-Asp) box helicase 5 		ENST00000225792 (DDX5-001) 64499616-64506521 protein_coding
ENST00000450599 (DDX5-006) 64499622-64506287 protein_coding
ENST00000540698 (DDX5-003) 64499616-64506289 nonsense_mediated_decay
ENST00000577787 (DDX5-019) 64502585-64503823 protein_coding
ENST00000577922 (DDX5-010) 64503441-64506731 protein_coding
ENST00000578190 (DDX5-027) 64503856-64505390 protein_coding
ENST00000578400 (DDX5-028) 64503095-64506323 nonsense_mediated_decay
ENST00000578491 (DDX5-023) 64500824-64503096 processed_transcript
ENST00000578758 (DDX5-030) 64500134-64502350 retained_intron
ENST00000578804 (DDX5-005) 64499914-64505956 protein_coding
ENST00000579091 (DDX5-014) 64504015-64505451 protein_coding
ENST00000579461 (DDX5-029) 64501876-64503246 retained_intron
ENST00000579996 (DDX5-007) 64502070-64503435 protein_coding
ENST00000580026 (DDX5-031) 64500110-64501902 processed_transcript
ENST00000581230 (DDX5-002) 64499616-64506289 retained_intron
ENST00000581237 (DDX5-032) 64500185-64501697 processed_transcript
ENST00000581551 (DDX5-022) 64502900-64503561 retained_intron
ENST00000581693 (DDX5-004) 64499616-64506289 nonsense_mediated_decay
ENST00000581697 (DDX5-012) 64503568-64506626 protein_coding
ENST00000581806 (DDX5-009) 64503839-64506903 protein_coding
ENST00000582326 (DDX5-020) 64502930-64503684 retained_intron
ENST00000583201 (DDX5-021) 64502921-64503646 retained_intron
ENST00000583212 (DDX5-015) 64504078-64505281 protein_coding
ENST00000583239 (DDX5-013) 64503995-64505527 protein_coding
ENST00000583562 (DDX5-016) 64503720-64504289 retained_intron
ENST00000583699 (DDX5-033) 64506800-64507712 processed_transcript
ENST00000583894 (DDX5-017) 64502965-64504021 retained_intron
ENST00000584279 (DDX5-011) 64504064-64506686 protein_coding
ENST00000584500 (DDX5-034) 64506927-64508199 processed_transcript
ENST00000584549 (DDX5-018) 64502730-64503848 retained_intron
ENST00000585060 (DDX5-026) 64504060-64506289 protein_coding
ENST00000585111 (DDX5-008) 64504755-64507530 protein_coding
ENST00000585223 (DDX5-025) 64504358-64506289 retained_intron
ENST00000585317 (DDX5-024) 64501888-64502902 retained_intron
ENSG00000256525 (POLG2)
polymerase (DNA directed), gamma 2, accessory subunit 		ENST00000539111 (POLG2-001) 64477785-64497036 protein_coding
ENST00000577506 (POLG2-007) 64480289-64490969 processed_transcript
ENST00000578687 (POLG2-005) 64486989-64492910 processed_transcript
ENST00000578997 (POLG2-003) 64490862-64496755 nonsense_mediated_decay
ENST00000580490 (POLG2-010) 64480348-64484230 processed_transcript
ENST00000580893 (POLG2-004) 64490469-64493021 processed_transcript
ENST00000581355 (POLG2-006) 64477787-64492720 protein_coding
ENST00000582501 (POLG2-008) 64477964-64487474 processed_transcript
ENST00000585104 (POLG2-009) 64481324-64485794 processed_transcript
ENST00000585141 (POLG2-002) 64485158-64497019 retained_intron
ENSG00000256826 (AC138744.2)
 ENST00000538774 (AC138744.2-001) 64491523-64491789 processed_pseudogene
CIL_00012I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020718-ENSMUSG00000020719 CGP 10090 11:106768253-106789185
GeneTranscriptPositionBiotype
ENSMUSG00000020718 (Polg2)
polymerase (DNA directed), gamma 2, accessory subunit 		ENSMUST00000021060 (Polg2-001) 106768253-106779515 protein_coding
ENSMUST00000126201 (Polg2-002) 106775515-106779502 nonsense_mediated_decay
ENSMUST00000127061 (Polg2-004) 106768253-106779537 nonsense_mediated_decay
ENSMUST00000134029 (Polg2-005) 106771044-106779473 nonsense_mediated_decay
ENSMUST00000142590 (Polg2-006) 106772642-106773850 retained_intron
ENSMUST00000155107 (Polg2-003) 106768733-106779473 nonsense_mediated_decay
ENSMUSG00000020719 (Ddx5)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 		ENSMUST00000021062 (Ddx5-001) 106780355-106788532 protein_coding
ENSMUST00000106778 (Ddx5-006) 106783733-106785046 retained_intron
ENSMUST00000106779 (Ddx5-008) 106783312-106788467 processed_transcript
ENSMUST00000123339 (Ddx5-004) 106786071-106788883 protein_coding
ENSMUST00000127481 (Ddx5-007) 106781976-106788488 nonsense_mediated_decay
ENSMUST00000129585 (Ddx5-003) 106785496-106789185 protein_coding
ENSMUST00000130172 (Ddx5-009) 106782114-106783651 processed_transcript
ENSMUST00000133426 (Ddx5-002) 106781548-106788494 nonsense_mediated_decay
ENSMUST00000151741 (Ddx5-005) 106785143-106786050 processed_transcript
ENSMUSG00000040528 (Milr1)
mast cell immunoglobulin like receptor 1 		ENSMUST00000086353 (Milr1-001) 106751240-106767568 protein_coding
ENSMUST00000106794 (Milr1-006) 106751268-106767765 protein_coding
ENSMUST00000147326 (Milr1-002) 106751226-106768794 protein_coding
ENSMUST00000182023 (Milr1-007) 106751268-106768717 nonsense_mediated_decay
ENSMUST00000182479 (Milr1-008) 106754943-106768720 protein_coding
ENSMUST00000182896 (Milr1-003) 106751240-106767145 protein_coding
ENSMUST00000182908 (Milr1-004) 106751240-106767145 protein_coding
ENSMUST00000183111 (Milr1-005) 106751265-106768719 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00012I_0001ENSG00000108654ENST00000225792ENST00000450599ENST00000540698ENST00000578491ENST00000578804ENST00000581230ENST00000581237ENST00000581693ENSG00000256525ENST00000539111ENST00000577506ENST00000578687ENST00000580490ENST00000581355ENST00000582501ENST00000585141ENSG00000256826ENST00000538774CIL_00012I_0002ENSMUSG00000020718ENSMUST00000021060ENSMUST00000126201ENSMUST00000127061ENSMUST00000134029ENSMUST00000155107ENSMUSG00000020719ENSMUST00000021062ENSMUST00000106778ENSMUST00000127481ENSMUST00000129585ENSMUST00000130172ENSMUST00000133426ENSMUSG00000040528ENSMUST00000086353ENSMUST00000147326ENSMUST00000182023
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108654 ENST00000225792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.646±0.00 69.911±15.10 74.195±7.15 N/A
ENST00000450599 34.141±0.00 N/A N/A N/A 39.118±0.00 14.663±0.00 N/A 39.724±0.00 16.887±0.00 47.169±0.00 7.023±0.00 N/A 25.788±0.00 70.720±0.00
ENST00000540698 N/A N/A N/A 23.594±0.00 N/A N/A 15.985±0.00 15.085±0.00 33.637±0.00 N/A 14.418±0.00 61.118±24.00 52.246±0.00 95.930±0.00
ENST00000577787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578491 N/A N/A 153.057±0.00 112.221±0.00 275.658±0.00 N/A N/A 70.115±0.00 167.545±0.00 N/A N/A 153.275±0.00 N/A N/A
ENST00000578758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578804 30.249±0.00 N/A N/A 28.014±0.00 N/A N/A N/A N/A N/A N/A 6.592±0.00 N/A N/A N/A
ENST00000579091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581230 16.412±0.00 75.224±0.00 31.911±0.00 21.899±1.17 44.467±10.86 47.586±33.20 18.413±4.28 31.607±17.61 20.476±9.62 89.461±41.75 6.826±0.00 40.825±12.17 12.154±0.00 87.150±0.00
ENST00000581237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 282.078±0.00 144.067±0.00 429.166±0.00
ENST00000581551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581693 48.360±0.00 105.814±0.00 N/A 28.163±0.00 43.931±0.00 13.891±0.00 28.734±0.00 52.218±0.00 28.822±0.00 61.091±0.00 12.026±0.00 55.792±0.00 N/A 84.168±0.00
ENST00000581697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256525 ENST00000539111 1.647±0.00 1.501±0.00 N/A 0.407±0.00 1.866±0.00 N/A 1.318±0.00 N/A 0.419±0.16 N/A 1.449±0.00 4.184±1.76 0.789±0.06 12.249±6.39
ENST00000577506 N/A N/A N/A N/A N/A N/A 1.188±0.00 N/A 0.587±0.00 0.923±0.00 N/A N/A N/A N/A
ENST00000578687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.665±0.00 N/A N/A N/A
ENST00000578997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580490 N/A 4.656±0.00 N/A N/A N/A 1.122±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581355 N/A N/A N/A N/A N/A N/A N/A 1.183±0.00 N/A N/A N/A 1.776±0.00 N/A N/A
ENST00000582501 N/A 2.315±0.00 N/A N/A 0.812±0.00 0.258±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585141 0.498±0.00 2.110±0.00 0.330±0.00 N/A N/A 0.214±0.00 N/A 0.613±0.00 0.884±0.00 N/A N/A 1.312±0.00 0.292±0.04 1.303±0.00
ENSG00000256826 ENST00000538774 0.322±0.00 N/A N/A 0.529±0.00 0.495±0.00 N/A 0.444±0.00 0.140±0.00 N/A N/A N/A N/A 0.272±0.03 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020718 ENSMUST00000021060 1.409±0.26 N/A 2.308±0.60 1.014±0.43 1.548±0.43 3.671±2.05 0.883±0.32 1.638±0.80 1.740±0.70 1.885±0.00 0.976±0.33 2.263±0.37 1.266±0.12 0.815±0.15
ENSMUST00000126201 N/A 3.781±0.89 N/A N/A N/A 3.300±1.39 N/A N/A N/A N/A N/A 2.651±0.03 N/A N/A
ENSMUST00000127061 1.186±0.00 2.624±1.12 N/A 0.811±0.10 2.869±1.52 3.711±0.00 N/A 1.172±0.52 0.780±0.15 1.352±0.34 0.367±0.09 2.465±1.12 0.726±0.05 0.544±0.00
ENSMUST00000134029 0.617±0.00 0.786±0.05 1.214±0.00 0.765±0.44 1.957±0.71 1.858±0.52 0.593±0.06 1.011±0.32 1.101±0.46 1.881±0.15 0.266±0.11 1.703±0.31 0.704±0.27 0.624±0.32
ENSMUST00000142590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155107 0.860±0.18 N/A 1.162±0.00 0.569±0.25 1.838±0.00 N/A N/A 0.694±0.00 0.971±0.36 1.097±0.00 0.195±0.00 1.355±0.15 0.598±0.07 0.335±0.10
ENSMUSG00000020719 ENSMUST00000021062 40.558±14.35 N/A 73.258±8.14 150.317±65.35 38.952±1.81 31.452±5.67 23.242±1.28 41.094±8.16 41.881±17.43 69.738±13.34 40.552±3.58 91.701±57.44 79.591±32.90 73.549±39.87
ENSMUST00000106778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 309.197±0.00 164.031±43.85 646.532±0.00
ENSMUST00000106779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127481 N/A 2798.367±70.51 N/A N/A 405.435±180.25 350.018±71.70 N/A 70.559±3.98 157.617±33.47 311.029±119.68 N/A 774.687±452.27 N/A N/A
ENSMUST00000129585 N/A 205.890±15.54 N/A N/A 104.606±15.28 68.845±14.54 N/A 46.580±0.00 27.205±4.71 N/A N/A 124.788±17.31 N/A 228.920±25.91
ENSMUST00000130172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 676.513±0.00 442.630±55.97 2051.430±0.00
ENSMUST00000133426 106.555±11.37 N/A 203.310±24.11 125.591±30.91 91.521±12.65 50.335±6.45 67.900±6.11 57.667±4.58 50.789±20.24 143.788±20.95 78.905±10.68 97.818±51.14 62.454±22.31 63.059±3.21
ENSMUST00000151741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040528 ENSMUST00000086353 N/A N/A 1.052±0.00 N/A 2.370±0.00 N/A N/A N/A 2.169±0.38 N/A 0.446±0.00 N/A N/A N/A
ENSMUST00000106794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147326 N/A N/A N/A N/A N/A N/A N/A N/A 1.492±0.00 N/A N/A N/A N/A N/A
ENSMUST00000182023 N/A N/A N/A N/A 0.986±0.00 N/A N/A N/A N/A 1.169±0.00 N/A N/A N/A N/A
ENSMUST00000182479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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