C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin H
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022030 Ccnh-001 ENSMUSG00000021548 10090 + 13:85189408-85213723 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022030
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022030 5.283±0.79 10.510±0.00 8.901±1.58 15.200±0.66 2.801±0.46 2.975±0.95 4.124±1.09 4.585±2.07 4.706±0.00 4.729±0.28 6.488±1.91 6.091±2.27 4.801±0.66

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0004693 ISS cyclin-dependent protein serine/threonine kinase activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005675 ISS holo TFIIH complex
GO:0006200 IEA ATP catabolic process
GO:0006366 ISS transcription from RNA polymerase II promoter
GO:0006468 IEA protein phosphorylation
GO:0007049 IEA cell cycle
GO:0008094 ISS DNA-dependent ATPase activity
GO:0008353 ISS RNA polymerase II carboxy-terminal domain kinase activity
GO:0016301 IDA kinase activity
GO:0016538 IEA cyclin-dependent protein serine/threonine kinase regulator activity
GO:0019901 IEA protein kinase binding
GO:0019907 IEA cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0070985 IEA TFIIK complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256897 CCNH-001 protein_coding Homo_sapiens 0 1308
ENST00000504115 CCNH-008 retained_intron Homo_sapiens 0 902
ENST00000504878 CCNH-002 protein_coding Homo_sapiens 0 1175
ENST00000505230 CCNH-005 retained_intron Homo_sapiens 0 405
ENST00000505587 CCNH-004 retained_intron Homo_sapiens 0 355
ENST00000508855 CCNH-003 protein_coding Homo_sapiens 0 992
ENST00000510020 CCNH-006 processed_transcript Homo_sapiens 0 403
ENST00000510921 CCNH-010 processed_transcript Homo_sapiens 0 427
ENST00000511207 CCNH-009 retained_intron Homo_sapiens 0 399
ENST00000513499 CCNH-007 processed_transcript Homo_sapiens 0 403

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