C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin H
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000508855 CCNH-003 ENSG00000134480 9606 - 5:87393417-87411294 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLungOvaryENST00000508855
Transcript ID Colon Lung Ovary
ENST00000508855 3.004±0.00 5.365±0.00 7.741±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TN CIL_0005TN_0002 CGP 5:86617904-87391931
CIL_0005TO CIL_0005TO_0002 CGP 5:87267888-87413019

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016538 IEA cyclin-dependent protein serine/threonine kinase regulator activity
GO:0016591 IEA DNA-directed RNA polymerase II, holoenzyme
GO:0019901 IEA protein kinase binding
GO:0051726 IEA regulation of cell cycle
GO:0070985 IEA TFIIK complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164127 Ccnh-002 protein_coding Mus_musculus 0 1009
ENSMUST00000022030 Ccnh-001 protein_coding Mus_musculus 0 992
ENSMUST00000119689 Gm12955-001 processed_pseudogene Mus_musculus 0 845
ENSMUST00000163600 Ccnh-003 protein_coding Mus_musculus 0 499
ENSMUST00000163713 Ccnh-006 protein_coding Mus_musculus 0 412
ENSMUST00000165077 Ccnh-005 protein_coding Mus_musculus 0 202
ENSMUST00000166932 Ccnh-007 retained_intron Mus_musculus 0.0000000000002 82
ENSMUST00000172029 Ccnh-004 processed_transcript Mus_musculus 0.0000000000002 82

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