C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin H
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504115 CCNH-008 ENSG00000134480 9606 - 5:87394326-87408186 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungMuscleOvaryTestisENST00000504115
Transcript ID Liver Lung Muscle Ovary Testis
ENST00000504115 6.992±0.00 17.178±0.00 6.638±0.00 8.845±0.00 32.766±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TN CIL_0005TN_0002 CGP 5:86617904-87391931
CIL_0005TO CIL_0005TO_0002 CGP 5:87267888-87413019

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022030 Ccnh-001 protein_coding Mus_musculus 0 902
ENSMUST00000164127 Ccnh-002 protein_coding Mus_musculus 0 791
ENSMUST00000119689 Gm12955-001 processed_pseudogene Mus_musculus 0 747
ENSMUST00000163600 Ccnh-003 protein_coding Mus_musculus 0 473
ENSMUST00000163713 Ccnh-006 protein_coding Mus_musculus 0 412
ENSMUST00000166932 Ccnh-007 retained_intron Mus_musculus 0 193
ENSMUST00000172029 Ccnh-004 processed_transcript Mus_musculus 0 193

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