C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thyrotroph embryonic factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023024 Tef-006 ENSMUSG00000022389 10090 + 15:81811414-81826698 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023024
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023024 12.948±4.91 22.279±3.17 26.790±0.16 8.341±5.81 12.165±0.98 5.395±1.01 7.911±1.21 12.679±0.41 4.691±3.09 19.229±8.43 43.471±5.87 20.424±7.05 2.870±1.22 4.334±2.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065M CIL_00065M_0002 CGP 15:81744848-81826861

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003690 IDA double-stranded DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0042803 IEA protein homodimerization activity
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity
GO:0048511 IEA rhythmic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266304 TEF-001 protein_coding Homo_sapiens 0 1664
ENST00000406644 TEF-003 protein_coding Homo_sapiens 0 1360
ENST00000413942 TEF-004 protein_coding Homo_sapiens 0 682

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