C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphomannomutase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482178 PMM1-004 ENSG00000100417 9606 - 22:41576903-41585402 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLungENST00000482178
Transcript ID Colon Lung
ENST00000482178 0.625±0.00 0.424±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000V8 CIL_0000V8_0002 CGP 22:41525804-41577741
CIL_00023C CIL_00023C_0001 CGP 22:41560763-41589890

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071462 Pmm1-002 protein_coding Mus_musculus 0 547
ENSMUST00000023112 Pmm1-001 protein_coding Mus_musculus 0 547
ENSMUST00000155781 Pmm1-004 nonsense_mediated_decay Mus_musculus 0 470
ENSMUST00000147645 Pmm1-003 retained_intron Mus_musculus 3e-35 154

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