C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025885 Sssca1-001 ENSMUSG00000079478 10090 - 19:5730303-5731721 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000025885
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000025885 31.763±5.21 59.695±14.22 24.817±5.18 20.362±0.00 24.981±4.08 21.546±7.79 23.874±3.76 27.170±12.32 16.407±1.73 52.702±14.78 16.558±6.38 48.169±20.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309328 SSSCA1-001 protein_coding Homo_sapiens 0 645
ENST00000526877 SSSCA1-004 protein_coding Homo_sapiens 0 536
ENST00000527920 SSSCA1-005 protein_coding Homo_sapiens 0 326
ENST00000531405 SSSCA1-002 protein_coding Homo_sapiens 0 601
ENST00000533115 SSSCA1-006 protein_coding Homo_sapiens 0 597

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