C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Sjogren syndrome/scleroderma autoantigen 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000526877  |
SSSCA1-004 |
ENSG00000173465 |
9606 | + |
11:65570487-65571858  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008W1 | CIL_0008W1_0001 | VISTA | 11:65187233-65790923 |
| CIL_0003XG | CIL_0003XG_0002 | CGP | 11:65570430-65574198 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000160852
|
Sssca1-006 | nonsense_mediated_decay | Mus_musculus | 0 | 560 |
|
ENSMUST00000025885
|
Sssca1-001 | protein_coding | Mus_musculus | 0 | 536 |
|
ENSMUST00000159693
|
Sssca1-002 | protein_coding | Mus_musculus | 0 | 512 |
|
ENSMUST00000159008
|
Sssca1-005 | retained_intron | Mus_musculus | 0 | 261 |
|
ENSMUST00000160141
|
Sssca1-004 | retained_intron | Mus_musculus | 3.00018e-42 | 176 |
