C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgi-specific brefeldin A-resistance factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026254 Gbf1-001 ENSMUSG00000025224 10090 + 19:46152509-46286510 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026254
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026254 10.490±2.38 18.908±0.71 5.437±0.01 6.962±2.67 11.184±3.75 16.696±1.04 4.710±0.22 6.346±1.88 3.694±1.55 11.495±2.16 4.424±1.33 12.153±4.48 6.097±1.54 20.298±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WI CIL_0005WI_0002 CGP 19:46135685-46286510
CIL_0005WJ CIL_0005WJ_0002 CGP 19:46152509-46312090

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 IBA ARF guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0005777 IEA peroxisome
GO:0005788 IEA endoplasmic reticulum lumen
GO:0005794 IEA Golgi apparatus
GO:0005795 IEA Golgi stack
GO:0005801 IEA cis-Golgi network
GO:0005802 IBA trans-Golgi network
GO:0016020 IEA membrane
GO:0016192 IBA vesicle-mediated transport
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369983 GBF1-001 protein_coding Homo_sapiens 0 7468
ENST00000476019 GBF1-002 processed_transcript Homo_sapiens 0 241

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