Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	interferon induced transmembrane protein 3
ENSMUST00000026565	Ifitm3-001	ENSMUSG00000025492	10090	-	7:141009586-141010770	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000026565	389.284±120.58	84.028±4.58	275.232±1.92	5.424±1.96	264.293±62.82	77.904±6.92	106.371±9.66	122.250±11.40	297.174±246.79	310.703±9.71	28.981±1.63	262.519±94.58	43.380±31.06	7.481±3.70

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0002UG	CIL_0002UG_0003	CGP	7:140967221-141010770

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005634	IDA	nucleus
GO:0005737	IDA	cytoplasm
GO:0005764	IEA	lysosome
GO:0005768	IEA	endosome
GO:0005783	IDA	endoplasmic reticulum
GO:0005886	IEA	plasma membrane
GO:0007507	IEA	heart development
GO:0008285	IDA	negative regulation of cell proliferation
GO:0009615	IDA	response to virus
GO:0009986	IDA	cell surface
GO:0016021	IEA	integral component of membrane
GO:0016023	IDA	cytoplasmic membrane-bounded vesicle
GO:0045177	IDA	apical part of cell
GO:0046597	IDA	negative regulation of viral entry into host cell
GO:0051607	IDA	defense response to virus
GO:0055007	IEA	cardiac muscle cell differentiation
GO:0060337	IDA	type I interferon signaling pathway

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000399817	IFITM2-001	protein_coding	Homo_sapiens	0	211
ENST00000527146	IFITM2-002	nonsense_mediated_decay	Homo_sapiens	6e-28	128
ENST00000533141	IFITM2-003	protein_coding	Homo_sapiens	0	211
ENST00000602569	IFITM2-005	protein_coding	Homo_sapiens	0	211
ENST00000616316	IFITM2-201	protein_coding	Homo_sapiens	0	211

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