C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: interferon induced transmembrane protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527146 IFITM2-002 ENSG00000185201 9606 + 11:308320-309392 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000527146
Transcript ID Kidney
ENST00000527146 6.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UF CIL_0002UF_0001 CGP 11:298200-315272
CIL_0002UG CIL_0002UG_0001 CGP 11:307631-315272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0009607 IEA response to biotic stimulus
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026565 Ifitm3-001 protein_coding Mus_musculus 6e-28 128
ENSMUST00000116005 Gm11951-001 processed_pseudogene Mus_musculus 1e-25 121
ENSMUST00000026564 Ifitm1-003 protein_coding Mus_musculus 1e-24 117
ENSMUST00000106040 Ifitm1-002 protein_coding Mus_musculus 1e-24 117
ENSMUST00000106042 Ifitm1-001 protein_coding Mus_musculus 1e-24 117
ENSMUST00000081649 Ifitm2-201 protein_coding Mus_musculus 2e-22 110
ENSMUST00000176080 Taf6l-006 retained_intron Mus_musculus 0.000000000009 75

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