C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon induced transmembrane protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000602569 IFITM2-005 ENSG00000185201 9606 + 11:308217-309395 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000602569
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000602569 316.410±0.00 327.739±0.00 2.983±0.00 52.077±0.00 89.078±0.00 261.764±0.00 68.482±0.00 212.826±0.00 498.232±0.00 1058.490±0.00 26.053±24.09 172.805±77.83 273.287±117.24 82.721±57.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UF CIL_0002UF_0001 CGP 11:298200-315272
CIL_0002UG CIL_0002UG_0001 CGP 11:307631-315272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0009607 IEA response to biotic stimulus
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116005 Gm11951-001 processed_pseudogene Mus_musculus 0 224
ENSMUST00000081649 Ifitm2-201 protein_coding Mus_musculus 0 213
ENSMUST00000026564 Ifitm1-003 protein_coding Mus_musculus 0 211
ENSMUST00000106040 Ifitm1-002 protein_coding Mus_musculus 0 211
ENSMUST00000106042 Ifitm1-001 protein_coding Mus_musculus 0 211
ENSMUST00000026565 Ifitm3-001 protein_coding Mus_musculus 0 211
ENSMUST00000176080 Taf6l-006 retained_intron Mus_musculus 1e-25 121

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