C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing Tcp1, subunit 8 (theta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026704 Cct8-001 ENSMUSG00000025613 10090 - 16:87483326-87495873 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026704
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026704 24.031±7.64 22.778±11.60 40.124±2.03 46.284±19.98 15.460±4.78 15.994±2.94 15.404±3.01 21.792±7.06 43.257±26.02 16.489±5.22 20.119±1.18 20.240±8.61 56.071±24.76 30.559±6.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CH CIL_0003CH_0002 CGP 16:87433407-87483517
CIL_000313 CIL_000313_0002 CGP 16:87454703-87495873
CIL_0000MN CIL_0000MN_0003 CGP 16:87483326-87595336

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002199 IDA zona pellucida receptor complex
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0005829 IEA cytosol
GO:0005832 IDA chaperonin-containing T-complex
GO:0005874 IEA microtubule
GO:0006457 IEA protein folding
GO:0007339 IDA binding of sperm to zona pellucida
GO:0016235 IEA aggresome
GO:0044297 IDA cell body
GO:0045111 IEA intermediate filament cytoskeleton
GO:0046931 IMP pore complex assembly
GO:0051082 IEA unfolded protein binding
GO:0070062 IEA extracellular vesicular exosome
GO:1901998 IMP toxin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286788 CCT8-003 protein_coding Homo_sapiens 0 2032
ENST00000413611 CCT8P1-001 processed_pseudogene Homo_sapiens 0 1799
ENST00000431234 CCT8-006 protein_coding Homo_sapiens 0 717
ENST00000432178 CCT8-001 protein_coding Homo_sapiens 0 401
ENST00000470450 CCT8-004 processed_transcript Homo_sapiens 0 1923
ENST00000475205 CCT8-011 retained_intron Homo_sapiens 0 309
ENST00000480359 CCT8-010 processed_transcript Homo_sapiens 0 361
ENST00000481059 CCT8-007 processed_transcript Homo_sapiens 0 686
ENST00000484403 CCT8-008 retained_intron Homo_sapiens 0 676
ENST00000494296 CCT8-009 processed_transcript Homo_sapiens 0 348
ENST00000496121 CCT8-005 retained_intron Homo_sapiens 0 732
ENST00000540844 CCT8-201 protein_coding Homo_sapiens 0 1712

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