C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing TCP1, subunit 8 (theta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000540844 CCT8-201 ENSG00000156261 9606 - 21:29056322-29073797 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000540844
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000540844 21.146±0.00 25.380±0.00 26.734±0.00 24.961±0.00 17.547±0.00 6.617±0.00 28.551±0.00 12.746±0.00 16.662±0.00 12.191±0.00 68.539±0.00 40.253±0.00 44.949±6.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000313 CIL_000313_0001 CGP 21:29024629-29073797
CIL_0000MN CIL_0000MN_0002 CGP 21:29055805-29175889

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0005829 IDA cytosol
GO:0005874 IDA microtubule
GO:0006200 TAS ATP catabolic process
GO:0006457 TAS:IEA protein folding
GO:0016235 IDA aggresome
GO:0042623 TAS ATPase activity, coupled
GO:0044267 TAS:IEA cellular protein metabolic process
GO:0045111 IDA intermediate filament cytoskeleton
GO:0051082 IEA unfolded protein binding
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177376 Cct8-002 nonsense_mediated_decay Mus_musculus 0 1903
ENSMUST00000026704 Cct8-001 protein_coding Mus_musculus 0 1712
ENSMUST00000175977 Cct8-003 protein_coding Mus_musculus 0 1347
ENSMUST00000175750 Cct8-005 protein_coding Mus_musculus 0 760
ENSMUST00000176041 Cct8-007 protein_coding Mus_musculus 0 470
ENSMUST00000177301 Cct8-006 processed_transcript Mus_musculus 0 449
ENSMUST00000176750 Cct8-008 protein_coding Mus_musculus 0 370
ENSMUST00000176241 Cct8-010 retained_intron Mus_musculus 0 292
ENSMUST00000177485 Cct8-004 retained_intron Mus_musculus 0 292
ENSMUST00000176589 Cct8-009 retained_intron Mus_musculus 0 270

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