C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000313_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156256-ENSG00000156261 CGP 9606 21:29024629-29073797
GeneTranscriptPositionBiotype
ENSG00000156256 (USP16)
ubiquitin specific peptidase 16 		ENST00000334352 (USP16-003) 29024651-29054488 protein_coding
ENST00000399973 (USP16-006) 29024656-29034919 protein_coding
ENST00000399975 (USP16-001) 29024629-29054488 protein_coding
ENST00000399976 (USP16-002) 29024629-29054488 protein_coding
ENST00000474835 (USP16-004) 29024651-29054488 retained_intron
ENST00000485067 (USP16-005) 29052123-29054488 retained_intron
ENSG00000156261 (CCT8)
chaperonin containing TCP1, subunit 8 (theta) 		ENST00000286788 (CCT8-003) 29056324-29073797 protein_coding
ENST00000431234 (CCT8-006) 29062209-29073565 protein_coding
ENST00000432178 (CCT8-001) 29055805-29061376 protein_coding
ENST00000470450 (CCT8-004) 29056324-29073639 processed_transcript
ENST00000475205 (CCT8-011) 29062169-29063468 retained_intron
ENST00000480359 (CCT8-010) 29062128-29062737 processed_transcript
ENST00000481059 (CCT8-007) 29065076-29072236 processed_transcript
ENST00000484403 (CCT8-008) 29065060-29073615 retained_intron
ENST00000494296 (CCT8-009) 29067590-29073432 processed_transcript
ENST00000496121 (CCT8-005) 29056324-29062867 retained_intron
ENST00000540844 (CCT8-201) 29056322-29073797 protein_coding
ENSG00000231125 (AF129075.5)
 ENST00000457162 (AF129075.5-001) 29058073-29060095 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_000313_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025616-ENSMUSG00000025613 CGP 10090 16:87454703-87495873
GeneTranscriptPositionBiotype
ENSMUSG00000025613 (Cct8)
chaperonin containing Tcp1, subunit 8 (theta) 		ENSMUST00000026704 (Cct8-001) 87483326-87495873 protein_coding
ENSMUST00000175750 (Cct8-005) 87484911-87488843 protein_coding
ENSMUST00000175977 (Cct8-003) 87483988-87495788 protein_coding
ENSMUST00000176041 (Cct8-007) 87488931-87495859 protein_coding
ENSMUST00000176241 (Cct8-010) 87485579-87486355 retained_intron
ENSMUST00000176589 (Cct8-009) 87485727-87486497 retained_intron
ENSMUST00000176750 (Cct8-008) 87490488-87495704 protein_coding
ENSMUST00000177301 (Cct8-006) 87488845-87491448 processed_transcript
ENSMUST00000177376 (Cct8-002) 87483988-87495788 nonsense_mediated_decay
ENSMUST00000177485 (Cct8-004) 87485439-87486070 retained_intron
ENSMUSG00000025616 (Usp16)
ubiquitin specific peptidase 16 		ENSMUST00000026710 (Usp16-001) 87454703-87483517 protein_coding
ENSMUST00000119504 (Usp16-006) 87454979-87483310 protein_coding
ENSMUST00000131206 (Usp16-003) 87455043-87471024 retained_intron
ENSMUST00000131356 (Usp16-008) 87454985-87462049 protein_coding
ENSMUST00000135399 (Usp16-007) 87472854-87479913 retained_intron
ENSMUST00000144759 (Usp16-004) 87455058-87483310 nonsense_mediated_decay
ENSMUST00000144886 (Usp16-002) 87455027-87461566 retained_intron
ENSMUST00000146386 (Usp16-005) 87473089-87479207 retained_intron
ENSMUST00000149656 (Usp16-009) 87481438-87483180 retained_intron
ENSMUST00000177275 (Usp16-012) 87482851-87483298 retained_intron
ENSMUST00000177538 (Usp16-011) 87455049-87466346 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000313_0001ENSG00000156256ENST00000334352ENST00000399973ENST00000399975ENST00000399976ENST00000474835ENST00000485067ENSG00000156261ENST00000286788ENST00000431234ENST00000432178ENST00000470450ENST00000475205ENST00000480359ENST00000481059ENST00000484403ENST00000494296ENST00000496121ENST00000540844ENSG00000231125ENST00000457162CIL_000313_0002ENSMUSG00000025613ENSMUST00000026704ENSMUST00000175750ENSMUST00000175977ENSMUST00000176041ENSMUST00000176241ENSMUST00000176589ENSMUST00000176750ENSMUST00000177301ENSMUST00000177376ENSMUST00000177485ENSMUSG00000025616ENSMUST00000026710ENSMUST00000119504ENSMUST00000131206ENSMUST00000131356ENSMUST00000135399ENSMUST00000144759ENSMUST00000144886ENSMUST00000146386ENSMUST00000149656ENSMUST00000177275ENSMUST00000177538
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000313_0001ENSG00000156256ENST00000334352ENST00000399973ENST00000399975ENST00000399976ENST00000474835ENST00000485067ENSG00000156261ENST00000286788ENST00000470450ENST00000496121ENST00000540844ENSG00000231125ENST00000457162CIL_000313_0002ENSMUSG00000025613ENSMUST00000026704ENSMUST00000175977ENSMUST00000177376ENSMUSG00000025616ENSMUST00000026710ENSMUST00000119504ENSMUST00000131206ENSMUST00000144759ENSMUST00000146386
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156256 ENST00000334352 N/A N/A N/A 2.546±1.01 N/A N/A 4.022±3.34 1.332±0.00 N/A N/A 0.733±0.00 N/A N/A N/A
ENST00000399973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.811±0.00 N/A N/A
ENST00000399975 2.475±0.00 4.790±0.00 0.458±0.00 1.997±1.51 3.925±1.63 4.910±2.23 2.882±0.00 3.728±2.16 1.412±0.20 3.422±0.86 4.717±0.00 3.853±0.34 2.329±0.13 8.459±0.39
ENST00000399976 3.811±0.00 5.861±0.00 0.763±0.00 3.077±0.00 3.818±1.59 1.125±0.19 N/A 1.424±0.88 3.692±0.88 3.836±0.00 0.987±0.00 5.290±2.32 5.164±4.26 5.980±0.00
ENST00000474835 N/A 1.530±0.00 0.810±0.00 N/A 1.446±0.00 N/A 0.309±0.00 0.718±0.00 0.576±0.00 N/A N/A N/A N/A N/A
ENST00000485067 N/A 2.612±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.046±0.00 N/A N/A
ENSG00000156261 ENST00000286788 22.973±0.00 26.091±0.00 8.910±0.00 19.748±2.87 17.116±6.27 25.527±7.26 8.611±0.00 13.898±0.00 19.219±0.00 12.482±4.99 13.090±2.88 53.751±10.92 41.958±4.20 23.774±8.30
ENST00000431234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470450 N/A N/A N/A 3.096±0.00 N/A 11.924±0.00 9.861±0.00 24.992±0.00 13.233±0.00 19.300±0.00 13.211±0.00 N/A N/A 30.836±0.00
ENST00000475205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496121 N/A N/A 2.556±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540844 21.146±0.00 25.380±0.00 N/A 26.734±0.00 24.961±0.00 17.547±0.00 6.617±0.00 28.551±0.00 12.746±0.00 16.662±0.00 12.191±0.00 68.539±0.00 40.253±0.00 44.949±6.10
ENSG00000231125 ENST00000457162 0.252±0.00 0.696±0.00 0.069±0.00 0.452±0.06 1.078±0.87 0.390±0.26 0.412±0.03 0.154±0.09 0.206±0.08 0.274±0.02 0.009±0.00 0.690±0.58 0.147±0.07 0.513±0.44
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025613 ENSMUST00000026704 24.031±7.64 22.778±11.60 40.124±2.03 46.284±19.98 15.460±4.78 15.994±2.94 15.404±3.01 21.792±7.06 43.257±26.02 16.489±5.22 20.119±1.18 20.240±8.61 56.071±24.76 30.559±6.00
ENSMUST00000175750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175977 N/A N/A N/A 40.121±0.00 N/A N/A N/A N/A N/A N/A N/A 44.962±0.00 45.930±30.47 51.022±0.00
ENSMUST00000176041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177376 N/A N/A 32.029±1.94 29.753±4.41 13.139±6.83 N/A 10.041±3.17 N/A 58.164±17.92 N/A 24.278±2.93 53.376±1.86 66.860±32.05 43.365±0.00
ENSMUST00000177485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025616 ENSMUST00000026710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.773±0.87 13.557±0.16 7.454±0.00 N/A
ENSMUST00000119504 N/A N/A N/A N/A N/A 3.116±0.25 N/A N/A N/A N/A N/A N/A 10.605±0.00 17.683±10.67
ENSMUST00000131206 N/A N/A N/A 24.590±0.00 N/A N/A N/A N/A N/A N/A N/A 38.215±0.00 23.701±0.00 78.050±0.00
ENSMUST00000131356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144759 4.581±0.29 N/A N/A N/A 5.496±1.56 N/A N/A N/A N/A 5.361±0.87 4.983±0.00 N/A N/A 12.816±2.22
ENSMUST00000144886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 138.720±0.00
ENSMUST00000149656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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