C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: La ribonucleoprotein domain family, member 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026862 Larp1b-201 ENSMUSG00000025762 10090 + 3:41033944-41040196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000026862
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026862 0.138±0.00 0.334±0.27 1.635±0.41 0.092±0.00 0.265±0.02 0.335±0.02 0.356±0.12 0.508±0.16 0.372±0.00 0.367±0.05 0.483±0.30 0.114±0.08 2.847±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YG CIL_0008YG_0002 VISTA 3:40857758-41459600
CIL_0006YL CIL_0006YL_0003 CGP 3:41021939-41083046

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0019013 IEA viral nucleocapsid
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326639 LARP1B-001 protein_coding Homo_sapiens 0 211
ENST00000503725 LARP1B-008 processed_transcript Homo_sapiens 0 211
ENST00000506199 LARP1B-010 processed_transcript Homo_sapiens 0 211
ENST00000507259 LARP1B-007 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000508648 LARP1B-009 processed_transcript Homo_sapiens 0 427

Loading