C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006YL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061169-ENSDARG00000030237 CGP 7955 17:26595657-26655320
GeneTranscriptPositionBiotype
ENSDARG00000030237 (pgrmc2)
progesterone receptor membrane component 2 		ENSDART00000023470 (pgrmc2-001) 26645160-26655320 protein_coding
ENSDART00000129201 (pgrmc2-201) 26645237-26655317 protein_coding
ENSDARG00000061169 (larp1b)
La ribonucleoprotein domain family, member 1B 		ENSDART00000025096 (larp1b-001) 26595657-26644506 protein_coding
ENSDART00000154921 (larp1b-002) 26625518-26643006 protein_coding
ENSDARG00000097490 (si:dkey-221l4.9)
si:dkey-221l4.9 		ENSDART00000155491 (si:dkey-221l4.9-001) 26625616-26643434 antisense
CIL_0006YL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138709-ENSG00000164040 CGP 9606 4:128061268-128288829
GeneTranscriptPositionBiotype
ENSG00000138709 (LARP1B)
La ribonucleoprotein domain family, member 1B 		ENST00000326639 (LARP1B-001) 128061268-128211988 protein_coding
ENST00000394288 (LARP1B-003) 128061335-128108901 protein_coding
ENST00000432347 (LARP1B-004) 128061348-128108901 protein_coding
ENST00000503725 (LARP1B-008) 128179347-128222595 processed_transcript
ENST00000506199 (LARP1B-010) 128179314-128222931 processed_transcript
ENST00000507259 (LARP1B-007) 128122117-128222926 nonsense_mediated_decay
ENST00000507377 (LARP1B-006) 128077841-128122352 protein_coding
ENST00000508648 (LARP1B-009) 128179314-128222595 processed_transcript
ENST00000508819 (LARP1B-002) 128061312-128179410 protein_coding
ENST00000512292 (LARP1B-005) 128061286-128123869 protein_coding
ENSG00000164040 (PGRMC2)
progesterone receptor membrane component 2 		ENST00000296425 (PGRMC2-007) 128269242-128287811 protein_coding
ENST00000394276 (PGRMC2-002) 128269256-128273061 protein_coding
ENST00000503588 (PGRMC2-005) 128270871-128286787 protein_coding
ENST00000503872 (PGRMC2-004) 128270705-128286878 protein_coding
ENST00000509070 (PGRMC2-006) 128271359-128287388 nonsense_mediated_decay
ENST00000512483 (PGRMC2-003) 128270612-128288203 protein_coding
ENST00000520121 (PGRMC2-001) 128269242-128288829 protein_coding
ENST00000613358 (PGRMC2-201) 128269237-128288822 protein_coding
ENSG00000241651 (RP11-214O14.1)
 ENST00000475247 (RP11-214O14.1-001) 128069014-128069612 processed_pseudogene
ENSG00000248394 (FOSL1P1)
FOS-like antigen 1 pseudogene 1 		ENST00000511041 (FOSL1P1-001) 128155389-128156204 processed_pseudogene
CIL_0006YL_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025762-ENSMUSG00000049940 CGP 10090 3:41021939-41083046
GeneTranscriptPositionBiotype
ENSMUSG00000025762 (Larp1b)
La ribonucleoprotein domain family, member 1B 		ENSMUST00000026862 (Larp1b-201) 41033944-41040196 protein_coding
ENSMUST00000065411 (Larp1b-202) 41021939-41040234 protein_coding
ENSMUST00000099121 (Larp1b-203) 41024373-41039236 protein_coding
ENSMUSG00000049940 (Pgrmc2)
progesterone receptor membrane component 2 		ENSMUST00000058578 (Pgrmc2-001) 41066326-41083046 protein_coding
ENSMUST00000124636 (Pgrmc2-002) 41068520-41070670 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YL_0001ENSDARG00000030237ENSDART00000023470ENSDART00000129201ENSDARG00000061169ENSDART00000025096ENSDART00000154921ENSDARG00000097490ENSDART00000155491CIL_0006YL_0002ENSG00000138709ENST00000326639ENST00000394288ENST00000432347ENST00000503725ENST00000506199ENST00000507259ENST00000507377ENST00000508648ENST00000508819ENST00000512292ENSG00000164040ENST00000296425ENST00000394276ENST00000503588ENST00000503872ENST00000509070ENST00000512483ENST00000520121ENST00000613358ENSG00000241651ENST00000475247ENSG00000248394ENST00000511041CIL_0006YL_0003ENSMUSG00000025762ENSMUST00000026862ENSMUST00000065411ENSMUST00000099121ENSMUSG00000049940ENSMUST00000058578ENSMUST00000124636
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YL_0001ENSDARG00000030237ENSDART00000023470ENSDART00000129201ENSDARG00000061169ENSDART00000025096ENSDART00000154921ENSDARG00000097490ENSDART00000155491CIL_0006YL_0002ENSG00000138709ENST00000326639ENST00000394288ENST00000432347ENST00000512292ENSG00000164040ENST00000296425ENST00000394276ENST00000503588ENST00000503872ENST00000512483ENST00000520121ENSG00000241651ENST00000475247ENSG00000248394ENST00000511041CIL_0006YL_0003ENSMUSG00000025762ENSMUST00000026862ENSMUST00000065411ENSMUST00000099121ENSMUSG00000049940ENSMUST00000058578ENSMUST00000124636
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000030237 ENSDART00000023470 N/A N/A N/A 24.492±10.74 N/A N/A 14.379±10.58 9.590±12.40 1.149±0.00 N/A 8.644±0.00 N/A N/A N/A
ENSDART00000129201 N/A N/A N/A N/A N/A N/A 0.648±0.56 2.277±0.00 0.994±0.00 N/A N/A N/A N/A N/A
ENSDARG00000061169 ENSDART00000025096 N/A N/A N/A 0.931±0.53 N/A N/A 5.338±0.16 8.683±0.00 5.037±0.00 N/A 5.565±0.00 N/A N/A N/A
ENSDART00000154921 N/A N/A N/A 0.656±0.00 N/A N/A N/A N/A N/A N/A 3.595±0.00 N/A N/A N/A
ENSDARG00000097490 ENSDART00000155491 N/A N/A N/A 2.203±0.02 N/A N/A N/A N/A N/A N/A 15.952±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138709 ENST00000326639 N/A 0.356±0.00 N/A 2.218±0.00 0.741±0.04 0.611±0.00 0.403±0.00 2.728±1.26 2.847±0.00 N/A N/A 0.759±0.00 0.585±0.25 10.102±0.00
ENST00000394288 4.331±0.00 2.113±0.00 N/A 3.552±0.00 1.876±0.00 2.118±0.00 2.484±0.00 5.707±0.12 4.859±3.03 2.297±1.42 3.141±2.48 3.691±2.39 3.519±1.37 12.913±0.00
ENST00000432347 N/A 0.710±0.00 N/A 0.895±0.00 0.937±0.00 2.696±0.00 N/A N/A N/A 1.190±0.00 N/A 1.312±0.64 N/A N/A
ENST00000503725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512292 N/A N/A 0.553±0.00 N/A 0.954±0.00 1.198±0.54 N/A N/A N/A 0.753±0.05 0.225±0.00 1.199±0.67 N/A N/A
ENSG00000164040 ENST00000296425 39.928±0.00 12.072±0.00 1.032±0.00 5.874±3.27 21.802±20.43 12.069±9.67 6.548±5.54 12.202±7.86 7.908±5.81 7.483±6.47 6.478±0.00 10.705±8.57 25.881±7.06 9.885±5.23
ENST00000394276 N/A N/A 1.100±0.00 N/A 1.507±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 29.412±0.00 89.609±0.00 31.788±0.00
ENST00000503872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.547±0.00 N/A 15.314±0.00
ENST00000509070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512483 38.071±0.00 7.663±0.00 4.095±0.00 7.711±0.00 17.244±13.32 17.127±12.47 6.798±4.72 15.039±4.32 9.786±3.53 15.767±0.00 9.293±0.00 5.807±2.59 20.065±0.54 13.128±0.00
ENST00000520121 N/A N/A N/A N/A N/A N/A N/A N/A 0.887±0.00 N/A N/A N/A N/A N/A
ENST00000613358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000241651 ENST00000475247 0.080±0.00 0.139±0.00 N/A 0.100±0.00 0.127±0.01 0.052±0.00 0.050±0.00 N/A N/A 0.311±0.21 0.095±0.00 0.300±0.19 N/A 0.025±0.00
ENSG00000248394 ENST00000511041 0.032±0.00 0.035±0.00 N/A 0.043±0.00 0.507±0.00 0.304±0.27 0.041±0.00 0.296±0.18 N/A 0.037±0.00 N/A 0.990±0.56 0.713±0.00 1.397±1.30
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025762 ENSMUST00000026862 0.138±0.00 0.334±0.27 1.635±0.41 0.092±0.00 0.265±0.02 0.335±0.02 0.356±0.12 N/A 0.508±0.16 0.372±0.00 0.367±0.05 0.483±0.30 0.114±0.08 2.847±0.20
ENSMUST00000065411 0.217±0.08 0.195±0.11 0.452±0.09 0.125±0.00 0.126±0.03 0.297±0.14 0.132±0.02 0.155±0.02 0.168±0.08 0.074±0.02 0.084±0.00 0.153±0.05 0.040±0.03 0.475±0.13
ENSMUST00000099121 0.553±0.24 0.449±0.24 0.773±0.12 N/A 0.520±0.24 0.790±0.16 0.245±0.01 0.847±0.20 0.278±0.08 0.161±0.00 0.370±0.06 0.765±0.20 0.116±0.05 9.331±2.03
ENSMUSG00000049940 ENSMUST00000058578 21.424±1.65 39.205±6.35 17.063±0.28 9.866±2.87 25.682±12.08 17.925±1.96 7.119±0.83 15.837±3.25 14.525±5.42 19.694±5.00 6.679±0.92 34.196±12.73 17.007±3.73 17.269±10.75
ENSMUST00000124636 N/A N/A N/A 25.229±0.00 N/A N/A N/A N/A N/A N/A N/A 36.354±0.00 36.807±3.33 68.990±0.00

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