C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: La ribonucleoprotein domain family, member 1B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025762 Larp1b 10090 + 3:41021939-41040234 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026862 Larp1b-201 41033944-41040196 protein_coding
  ENSMUST00000065411 Larp1b-202 41021939-41040234 protein_coding
  ENSMUST00000099121 Larp1b-203 41024373-41039236 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026862ENSMUST00000065411ENSMUST00000099121
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026862 0.138±0.00 0.334±0.27 1.635±0.41 0.092±0.00 0.265±0.02 0.335±0.02 0.356±0.12 N/A 0.508±0.16 0.372±0.00 0.367±0.05 0.483±0.30 0.114±0.08 2.847±0.20
ENSMUST00000065411 0.217±0.08 0.195±0.11 0.452±0.09 0.125±0.00 0.126±0.03 0.297±0.14 0.132±0.02 0.155±0.02 0.168±0.08 0.074±0.02 0.084±0.00 0.153±0.05 0.040±0.03 0.475±0.13
ENSMUST00000099121 0.553±0.24 0.449±0.24 0.773±0.12 N/A 0.520±0.24 0.790±0.16 0.245±0.01 0.847±0.20 0.278±0.08 0.161±0.00 0.370±0.06 0.765±0.20 0.116±0.05 9.331±2.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YG CIL_0008YG_0002 VISTA 3:40857758-41459600
CIL_0006YL CIL_0006YL_0003 CGP 3:41021939-41083046

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0019013 IEA viral nucleocapsid
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061169 larp1b La ribonucleoprotein domain family, member 1B protein_coding Danio_rerio
ENSG00000138709 LARP1B La ribonucleoprotein domain family, member 1B protein_coding Homo_sapiens

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